RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 ZNF277Q9NRM2 450 aaPredicted RBP16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 ZNF70Q9UC06 446 aaPredicted RBP16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 FAN1Q9Y2M0 1017 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 GCOM1H8Y6P7 765 aaPredicted RBP16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 CALUO43852 315 aaPredicted RBP16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 FTCDO95954 541 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 NR3C1P04150 777 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 POLR2MP0CAP2 368 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 XRCC5P13010 732 aaKnown RBP16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 NMT1P30419 496 aaKnown RBP16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 SLC7A5Q01650 507 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 EPM2AIP1Q7L775 607 aaPredicted RBP16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 ZC3H3Q8IXZ2 948 aaKnown RBP16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 MS4A14Q96JA4 679 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 SPAG5Q96R06 1193 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 PKD2L1Q9P0L9 805 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 ADAM21Q9UKJ8 722 aa16.36■□□□□ 0.21
VIPAS39-202ENST00000343765 ASTN1O14525 1302 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 PJA2O43164 708 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 FAM13AO94988 1023 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 EYA4O95677 639 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 AFPP02771 609 aaKnown RBP16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 ZC2HC1CQ53FD0 456 aaPredicted RBP16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 KLHDC7AQ5VTJ3 777 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 RINT1Q6NUQ1 792 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 RSBN1LQ6PCB5 846 aaPredicted RBP16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 MYCT1Q8N699 235 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 POLR3CQ9BUI4 534 aaPredicted RBP16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 TRAF3IP3Q9Y228 551 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 TMX2Q9Y320 296 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 PIK3CDO00329 1044 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 PALMO75781 387 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 KLRC1P26715 233 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 LMAN1P49257 510 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 KIAA0753Q2KHM9 967 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 HSP90B2PQ58FF3 399 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 OTOP1Q7RTM1 612 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 LARGE2Q8N3Y3 721 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 SPATA4Q8NEY3 305 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 SYN2Q92777 582 aaPredicted RBP16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 LRRC1Q9BTT6 524 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 TLR10Q9BXR5 811 aa16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 PACSIN2Q9UNF0 486 aaPredicted RBP16.35■□□□□ 0.21
VIPAS39-202ENST00000343765 ZNF646O15015 1829 aaPredicted RBP16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 DDX39AO00148 427 aaKnown RBP16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 GAS7O60861 476 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 SLITRK3O94933 977 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 CYP3A4P08684 503 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 SLC18A3Q16572 532 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 EXOC3L4Q17RC7 722 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 MAP9Q49MG5 647 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 OGFOD1Q8N543 542 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 SUPT20HQ8NEM7 779 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 FAM170AA1A519 330 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 TARSL2A2RTX5 802 aaKnown RBP16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 RBAK-RBAKDNI3L0D1 243 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 EPB41P11171 864 aaKnown RBP16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 TCP1P17987 556 aaKnown RBP16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 MCM3P25205 808 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 FAM193AP78312 1265 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 PTPROQ16827 1216 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 GJB7Q6PEY0 223 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 FRMD5Q7Z6J6 570 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 PLEKHA4Q9H4M7 779 aa16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 TYW1Q9NV66 732 aaKnown RBP16.34■□□□□ 0.21
VIPAS39-202ENST00000343765 A0A0U1RQG5 324 aaPredicted RBP16.33■□□□□ 0.21
VIPAS39-202ENST00000343765 PDXKO00764 312 aa16.33■□□□□ 0.21
VIPAS39-202ENST00000343765 UCHL3P15374 230 aa16.33■□□□□ 0.21
VIPAS39-202ENST00000343765 PTK2Q05397 1052 aa16.33■□□□□ 0.21
VIPAS39-202ENST00000343765 EN1Q05925 392 aaPredicted RBP16.33■□□□□ 0.21
VIPAS39-202ENST00000343765 CCDC70Q6NSX1 233 aa16.33■□□□□ 0.21
VIPAS39-202ENST00000343765 HSD17B14Q9BPX1 270 aa16.33■□□□□ 0.21
VIPAS39-202ENST00000343765 DMGDHQ9UI17 866 aaKnown RBP16.33■□□□□ 0.21
VIPAS39-202ENST00000343765 ARP10275 920 aa16.33■□□□□ 0.2
VIPAS39-202ENST00000343765 PON1P27169 355 aa16.33■□□□□ 0.2
VIPAS39-202ENST00000343765 RNASE9P60153 205 aaKnown RBP16.33■□□□□ 0.2
VIPAS39-202ENST00000343765 COG2Q14746 738 aa16.33■□□□□ 0.2
VIPAS39-202ENST00000343765 TXLNBQ8N3L3 684 aa16.33■□□□□ 0.2
VIPAS39-202ENST00000343765 FAM151AQ8WW52 585 aa16.33■□□□□ 0.2
VIPAS39-202ENST00000343765 LUC7LQ9NQ29 371 aaKnown RBP16.33■□□□□ 0.2
VIPAS39-202ENST00000343765 WRAP73Q9P2S5 460 aaPredicted RBP16.33■□□□□ 0.2
VIPAS39-202ENST00000343765 AJAP1Q9UKB5 411 aaPredicted RBP16.33■□□□□ 0.2
VIPAS39-202ENST00000343765 CNTNAP1P78357 1384 aa16.33■□□□□ 0.2
VIPAS39-202ENST00000343765 PSMD10O75832 226 aa16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 ZNF577Q9BSK1 485 aa16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 AIPL1Q9NZN9 384 aa16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 GCNT4Q9P109 453 aa16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 STK24Q9Y6E0 443 aa16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 RPL13P26373 211 aaKnown RBP16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 PAFAH1B1P43034 410 aa16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 SLC15A2Q16348 729 aa16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 CCNI2Q6ZMN8 369 aaPredicted RBP16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 ARHGAP27Q6ZUM4 889 aa16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 ZNF571Q7Z3V5 609 aaPredicted RBP16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 CHURC1Q8WUH1 139 aa16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 RIN2Q8WYP3 895 aaPredicted RBP16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 SELENOOQ9BVL4 669 aa16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 ACBD3Q9H3P7 528 aa16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 TGFB1I1O43294 461 aa16.32■□□□□ 0.2
VIPAS39-202ENST00000343765 PRELPP51888 382 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms