RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 FOSP01100 380 aaPredicted RBP4.01□□□□□ -1.77
CCDC66-202ENST00000341455 FDPSP14324 419 aaKnown RBP4.01□□□□□ -1.77
CCDC66-202ENST00000341455 TIMP2P16035 220 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 U2AF2P26368 475 aaKnown RBP eCLIP4.01□□□□□ -1.774e-6■■□□□ 13.2
CCDC66-202ENST00000341455 SLC1A4P43007 532 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 GNL2Q13823 731 aaKnown RBP4.01□□□□□ -1.77
CCDC66-202ENST00000341455 CDC37Q16543 378 aaPredicted RBP4.01□□□□□ -1.77
CCDC66-202ENST00000341455 RTN1Q16799 776 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 SLC39A5Q6ZMH5 540 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 CLEC17AQ6ZS10 378 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 GPR142Q7Z601 462 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 PLEKHH3Q7Z736 793 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 RETREG3Q86VR2 466 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 ATG4CQ96DT6 458 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 NAP1L4Q99733 375 aaKnown RBP4.01□□□□□ -1.77
CCDC66-202ENST00000341455 AMNQ9BXJ7 453 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 ACAD9Q9H845 621 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 CYP39A1Q9NYL5 469 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.01□□□□□ -1.77
CCDC66-202ENST00000341455 DDX20Q9UHI6 824 aaKnown RBP4.01□□□□□ -1.77
CCDC66-202ENST00000341455 TBX21Q9UL17 535 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 MRPL11Q9Y3B7 192 aaKnown RBP4.01□□□□□ -1.77
CCDC66-202ENST00000341455 ELP1O95163 1332 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 NLRC5Q86WI3 1866 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 DOCK5Q9H7D0 1870 aa4.01□□□□□ -1.77
CCDC66-202ENST00000341455 CCDC69A6NI79 296 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 TRIM75PA6NK02 468 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 MEIS2O14770 477 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 NKRFO15226 690 aaKnown RBP eCLIP4□□□□□ -1.77
CCDC66-202ENST00000341455 TREHO43280 583 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 EDIL3O43854 480 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 SORBS3O60504 671 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 PRDM1O75626 825 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 PAPLNO95428 1278 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 ZNF76P36508 570 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 SREBF1P36956 1147 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 CDK7P50613 346 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 RTP1P59025 263 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 RAB3GAP1Q15042 981 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 ME3Q16798 604 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 QRICH1Q2TAL8 776 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4□□□□□ -1.77
CCDC66-202ENST00000341455 EML3Q32P44 896 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 Q4G0T1 1027 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 PCNX4Q63HM2 1172 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 Q7L0L9 218 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 SIX5Q8N196 739 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 LRRC47Q8N1G4 583 aaKnown RBP4□□□□□ -1.77
CCDC66-202ENST00000341455 CTCFLQ8NI51 663 aaPredicted RBP4□□□□□ -1.77
CCDC66-202ENST00000341455 CCDC12Q8WUD4 166 aaPredicted RBP4□□□□□ -1.77
CCDC66-202ENST00000341455 DUSP9Q99956 384 aaKnown RBP4□□□□□ -1.77
CCDC66-202ENST00000341455 MTIF3Q9H2K0 278 aaKnown RBP4□□□□□ -1.77
CCDC66-202ENST00000341455 UPF2Q9HAU5 1272 aaKnown RBP4□□□□□ -1.77
CCDC66-202ENST00000341455 VTA1Q9NP79 307 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 FZD1Q9UP38 647 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 FAM50BQ9Y247 325 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 MRPL42Q9Y6G3 142 aaKnown RBP4□□□□□ -1.77
CCDC66-202ENST00000341455 KLF18A0A0U1RQI7 1052 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 TBX3O15119 743 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 MAFGO15525 162 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 PEX14O75381 377 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 SCG2P13521 617 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 MUTP22033 750 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 TRAPPC10P48553 1259 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 METAP2P50579 478 aaKnown RBP eCLIP4□□□□□ -1.77
CCDC66-202ENST00000341455 IRX3P78415 501 aaPredicted RBP4□□□□□ -1.77
CCDC66-202ENST00000341455 PTPN11Q06124 597 aaPredicted RBP4□□□□□ -1.77
CCDC66-202ENST00000341455 PPP4R3AQ6IN85 833 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 KCNV1Q6PIU1 500 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 SESTD1Q86VW0 696 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 CLEC10AQ8IUN9 316 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 STAG2Q8N3U4 1231 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 CCDC148Q8NFR7 591 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 BICD2Q8TD16 824 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 TIFAQ96CG3 184 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 RRP36Q96EU6 259 aaKnown RBP4□□□□□ -1.77
CCDC66-202ENST00000341455 RBCK1Q9BYM8 510 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 LMAN2LQ9H0V9 348 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 OSBPL2Q9H1P3 480 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 FOXP1Q9H334 677 aaPredicted RBP4□□□□□ -1.77
CCDC66-202ENST00000341455 FKBPLQ9UIM3 349 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 UBIAD1Q9Y5Z9 338 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 SMCHD1A6NHR9 2005 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 PATJQ8NI35 1801 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 COL4A3Q01955 1670 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 GOLGA8AA7E2F4 631 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 GOLGA8BA8MQT2 603 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 TMEM232C9JQI7 657 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 MPHOSPH10O00566 681 aaKnown RBP4□□□□□ -1.77
CCDC66-202ENST00000341455 BAIAP3O94812 1187 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 PLEKHA8P1O95397 391 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 TIMP1P01033 207 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 CALML3P27482 149 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 STAT3P40763 770 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 FLT3LGP49771 235 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 ATP1A2P50993 1020 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 SEC13P55735 322 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 GRM1Q13255 1194 aa4□□□□□ -1.77
CCDC66-202ENST00000341455 BMS1Q14692 1282 aaKnown RBP4□□□□□ -1.77
CCDC66-202ENST00000341455 WWC2Q6AWC2 1192 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms