RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 IKZF4Q9H2S9 585 aa16.71■□□□□ 0.27
PERM1-201ENST00000341290 SPON1Q9HCB6 807 aa16.71■□□□□ 0.27
PERM1-201ENST00000341290 RBAK-RBAKDNI3L0D1 243 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 MYO1FO00160 1098 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 TAL1P17542 331 aaPredicted RBP16.7■□□□□ 0.26
PERM1-201ENST00000341290 NR2F2P24468 414 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 ERVK-9P63128 1117 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 ZNF571Q7Z3V5 609 aaPredicted RBP16.7■□□□□ 0.26
PERM1-201ENST00000341290 SP8Q8IXZ3 490 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 JPH2Q9BR39 696 aaPredicted RBP16.7■□□□□ 0.26
PERM1-201ENST00000341290 DDX47Q9H0S4 455 aaKnown RBP16.7■□□□□ 0.26
PERM1-201ENST00000341290 GPR75-ASB3A0A0A6YYF3 556 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 TULP1O00294 542 aaPredicted RBP16.7■□□□□ 0.26
PERM1-201ENST00000341290 ZBTB7AO95365 584 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 SCP2P22307 547 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 NT5C2P49902 561 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 PSMC6P62333 389 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 SF3A3Q12874 501 aaKnown RBP eCLIP16.7■□□□□ 0.26
PERM1-201ENST00000341290 RPS6KA1Q15418 735 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 TRIM59Q8IWR1 403 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 USP38Q8NB14 1042 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 PSMD2Q13200 908 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 GLE1Q53GS7 698 aaKnown RBP16.7■□□□□ 0.26
PERM1-201ENST00000341290 MXD3Q9BW11 206 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 PSTPIP2Q9H939 334 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 TSKSQ9UJT2 592 aa16.7■□□□□ 0.26
PERM1-201ENST00000341290 UTRNP46939 3433 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 H0YHG0 523 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 RIMBP2O15034 1052 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 CPP00450 1065 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 FLT3P36888 993 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 SKOR1P84550 965 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 PABPC4Q13310 644 aaKnown RBP eCLIP16.69■□□□□ 0.26
PERM1-201ENST00000341290 CDC37Q16543 378 aaPredicted RBP16.69■□□□□ 0.26
PERM1-201ENST00000341290 SHROOM1Q2M3G4 852 aaPredicted RBP16.69■□□□□ 0.26
PERM1-201ENST00000341290 ADAT2Q7Z6V5 191 aaKnown RBP16.69■□□□□ 0.26
PERM1-201ENST00000341290 CCDC65Q8IXS2 484 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 TRIM31Q9BZY9 425 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 LUC7LQ9NQ29 371 aaKnown RBP16.69■□□□□ 0.26
PERM1-201ENST00000341290 LEMD3Q9Y2U8 911 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 ESYT2A0FGR8 921 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 E7EVH7 732 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 MED24O75448 989 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 ITGA4P13612 1032 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 HDLBPQ00341 1268 aaKnown RBP16.69■□□□□ 0.26
PERM1-201ENST00000341290 NAA35Q5VZE5 725 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 KCNV1Q6PIU1 500 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 SLC30A10Q6XR72 485 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 OTUD6BQ8N6M0 293 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 RPGRQ92834 1020 aaKnown RBP16.69■□□□□ 0.26
PERM1-201ENST00000341290 CNKSR1Q969H4 720 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 NEUROG2Q9H2A3 272 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 HDAC9Q9UKV0 1011 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 PCDHGC5Q9Y5F6 944 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 ABCB11O95342 1321 aa16.69■□□□□ 0.26
PERM1-201ENST00000341290 FAM196BA6NMK8 535 aa16.68■□□□□ 0.26
PERM1-201ENST00000341290 CC2D2BQ6DHV5 1058 aa16.68■□□□□ 0.26
PERM1-201ENST00000341290 CUL5Q93034 780 aa16.68■□□□□ 0.26
PERM1-201ENST00000341290 AJAP1Q9UKB5 411 aaPredicted RBP16.68■□□□□ 0.26
PERM1-201ENST00000341290 H0YIN7 160 aa16.68■□□□□ 0.26
PERM1-201ENST00000341290 CLIC2O15247 247 aa16.68■□□□□ 0.26
PERM1-201ENST00000341290 KIAA0754O94854 1291 aa16.68■□□□□ 0.26
PERM1-201ENST00000341290 CYP11B2P19099 503 aa16.68■□□□□ 0.26
PERM1-201ENST00000341290 GANQ9H2C0 597 aa16.68■□□□□ 0.26
PERM1-201ENST00000341290 KCTD10Q9H3F6 313 aa16.68■□□□□ 0.26
PERM1-201ENST00000341290 PCDHA2Q9Y5H9 948 aa16.68■□□□□ 0.26
PERM1-201ENST00000341290 PNMA6FA0A0J9YX94 578 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 SFI1A8K8P3 1242 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 C6orf229H3BNL8 230 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 TMOD1P28289 359 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 TNFRSF8P28908 595 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 GTF2IP78347 998 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 CYP4A11Q02928 519 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 KCNA1Q09470 495 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 PPP2R5AQ15172 486 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 ARSHQ5FYA8 562 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 UBLCP1Q8WVY7 318 aaPredicted RBP16.67■□□□□ 0.26
PERM1-201ENST00000341290 ATP6V1G3Q96LB4 118 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 LRRC27Q9C0I9 530 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 DDX4Q9NQI0 724 aaKnown RBP16.67■□□□□ 0.26
PERM1-201ENST00000341290 AMACRQ9UHK6 382 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 DDX60LQ5H9U9 1706 aaKnown RBP16.67■□□□□ 0.26
PERM1-201ENST00000341290 CETN3O15182 167 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 ECM2O94769 699 aaPredicted RBP16.67■□□□□ 0.26
PERM1-201ENST00000341290 HSD17B3P37058 310 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 TNNC1P63316 161 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 IFT88Q13099 833 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 RBM46Q8TBY0 533 aaKnown RBP16.67■□□□□ 0.26
PERM1-201ENST00000341290 RUBCNQ92622 972 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 CELF4Q9BZC1 486 aaKnown RBP16.67■□□□□ 0.26
PERM1-201ENST00000341290 LRRC4CQ9HCJ2 640 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 SBF1O95248 1867 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 NAV1Q8NEY1 1877 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 RSPH10B2B2RC85 870 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 KIF4AO95239 1232 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 RSPH10BP0C881 870 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 MYBP10242 640 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 UCHL3P15374 230 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 COPB2P35606 906 aa16.67■□□□□ 0.26
PERM1-201ENST00000341290 CASP4P49662 377 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms