RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 MATR3P43243 847 aaKnown RBP eCLIP15.98■□□□□ 0.158e-7■■■■□ 24.8
TDP2-201ENST00000341060 SNAP25P60880 206 aa15.98■□□□□ 0.15
TDP2-201ENST00000341060 ARID5AQ03989 594 aa15.98■□□□□ 0.15
TDP2-201ENST00000341060 KIAA0753Q2KHM9 967 aa15.98■□□□□ 0.15
TDP2-201ENST00000341060 C8orf74Q6P047 294 aa15.98■□□□□ 0.15
TDP2-201ENST00000341060 BTNL9Q6UXG8 535 aa15.98■□□□□ 0.15
TDP2-201ENST00000341060 COL2A1P02458 1487 aaPredicted RBP15.98■□□□□ 0.15
TDP2-201ENST00000341060 BTNL10A8MVZ5 291 aa15.98■□□□□ 0.15
TDP2-201ENST00000341060 ECE2O60344 883 aa15.98■□□□□ 0.15
TDP2-201ENST00000341060 AFPP02771 609 aaKnown RBP15.98■□□□□ 0.15
TDP2-201ENST00000341060 CYP3A4P08684 503 aa15.98■□□□□ 0.15
TDP2-201ENST00000341060 BMP3P12645 472 aa15.98■□□□□ 0.15
TDP2-201ENST00000341060 XRCC5P13010 732 aaKnown RBP15.98■□□□□ 0.15
TDP2-201ENST00000341060 IKQ13123 557 aaPredicted RBP15.98■□□□□ 0.15
TDP2-201ENST00000341060 MEI1Q5TIA1 1274 aa15.98■□□□□ 0.15
TDP2-201ENST00000341060 EMBQ6PCB8 327 aa15.98■□□□□ 0.15
TDP2-201ENST00000341060 KCTD17Q8N5Z5 321 aa15.98■□□□□ 0.15
TDP2-201ENST00000341060 RIN2Q8WYP3 895 aaPredicted RBP15.98■□□□□ 0.15
TDP2-201ENST00000341060 POLR3CQ9BUI4 534 aaPredicted RBP15.98■□□□□ 0.15
TDP2-201ENST00000341060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.98■□□□□ 0.15
TDP2-201ENST00000341060 TYW1Q9NV66 732 aaKnown RBP15.98■□□□□ 0.15
TDP2-201ENST00000341060 TULP2O00295 520 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 PIK3CDO00329 1044 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 IVLP07476 585 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 MYBP10242 640 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 UCHL3P15374 230 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 SLC7A5Q01650 507 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 C10orf76Q5T2E6 689 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 MS4A14Q96JA4 679 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 BZW2Q9Y6E2 419 aaKnown RBP15.97■□□□□ 0.15
TDP2-201ENST00000341060 ASTN1O14525 1302 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 GRID2IPA4D2P6 1211 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 PTK2Q05397 1052 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 EXOC3L4Q17RC7 722 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 SND1Q7KZF4 910 aaKnown RBP eCLIP15.97■□□□□ 0.15
TDP2-201ENST00000341060 IRF2BP2Q7Z5L9 587 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 HINFPQ9BQA5 517 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 PACSIN1Q9BY11 444 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 BHMT2Q9H2M3 363 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 OLFML3Q9NRN5 406 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 FBXL5Q9UKA1 691 aa15.97■□□□□ 0.15
TDP2-201ENST00000341060 RSPH10B2B2RC85 870 aa15.96■□□□□ 0.15
TDP2-201ENST00000341060 SLC16A3O15427 465 aaKnown RBP15.96■□□□□ 0.15
TDP2-201ENST00000341060 AKAP3O75969 853 aa15.96■□□□□ 0.15
TDP2-201ENST00000341060 EYA4O95677 639 aa15.96■□□□□ 0.15
TDP2-201ENST00000341060 FTCDO95954 541 aa15.96■□□□□ 0.15
TDP2-201ENST00000341060 RSPH10BP0C881 870 aa15.96■□□□□ 0.15
TDP2-201ENST00000341060 ACTN1P12814 892 aa15.96■□□□□ 0.15
TDP2-201ENST00000341060 SLC9A1P19634 815 aa15.96■□□□□ 0.15
TDP2-201ENST00000341060 PON1P27169 355 aa15.96■□□□□ 0.15
TDP2-201ENST00000341060 HOXA13P31271 388 aaPredicted RBP15.96■□□□□ 0.15
TDP2-201ENST00000341060 CYP4A11Q02928 519 aa15.96■□□□□ 0.15
TDP2-201ENST00000341060 CAVIN3Q969G5 261 aa15.96■□□□□ 0.15
TDP2-201ENST00000341060 ZNF622Q969S3 477 aaKnown RBP eCLIP15.96■□□□□ 0.15
TDP2-201ENST00000341060 SPAG5Q96R06 1193 aa15.96■□□□□ 0.15
TDP2-201ENST00000341060 METTL14Q9HCE5 456 aaKnown RBP15.96■□□□□ 0.15
TDP2-201ENST00000341060 SYNPO2Q9UMS6 1093 aa15.96■□□□□ 0.15
TDP2-201ENST00000341060 RABGAP1Q9Y3P9 1069 aa15.96■□□□□ 0.15
TDP2-201ENST00000341060 IGLV3-22A0A075B6J6 115 aa15.95■□□□□ 0.14
TDP2-201ENST00000341060 TBCAO75347 108 aaKnown RBP15.95■□□□□ 0.14
TDP2-201ENST00000341060 GH2P01242 217 aa15.95■□□□□ 0.14
TDP2-201ENST00000341060 NR3C1P04150 777 aa15.95■□□□□ 0.14
TDP2-201ENST00000341060 RPL13P26373 211 aaKnown RBP15.95■□□□□ 0.14
TDP2-201ENST00000341060 TEX2Q8IWB9 1127 aa15.95■□□□□ 0.14
TDP2-201ENST00000341060 CYP2W1Q8TAV3 490 aa15.95■□□□□ 0.14
TDP2-201ENST00000341060 INPP4AQ96PE3 977 aaPredicted RBP15.95■□□□□ 0.14
TDP2-201ENST00000341060 EIF2AK1Q9BQI3 630 aaKnown RBP15.95■□□□□ 0.14
TDP2-201ENST00000341060 RUSC1Q9BVN2 902 aa15.95■□□□□ 0.14
TDP2-201ENST00000341060 ATP8B3O60423 1300 aa15.95■□□□□ 0.14
TDP2-201ENST00000341060 ENTPD3O75355 529 aa15.95■□□□□ 0.14
TDP2-201ENST00000341060 PRKCIP41743 596 aa15.95■□□□□ 0.14
TDP2-201ENST00000341060 JAG1P78504 1218 aa15.95■□□□□ 0.14
TDP2-201ENST00000341060 MRPS25P82663 173 aaKnown RBP15.95■□□□□ 0.14
TDP2-201ENST00000341060 EPHA7Q15375 998 aa15.95■□□□□ 0.14
TDP2-201ENST00000341060 ENOX2Q16206 610 aaKnown RBP15.95■□□□□ 0.14
TDP2-201ENST00000341060 RBM26Q5T8P6 1007 aaKnown RBP15.95■□□□□ 0.14
TDP2-201ENST00000341060 ZNF571Q7Z3V5 609 aaPredicted RBP15.95■□□□□ 0.14
TDP2-201ENST00000341060 SLC35C1Q96A29 364 aa15.95■□□□□ 0.14
TDP2-201ENST00000341060 EML1O00423 815 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 CES2O00748 559 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 ZBTB7AO95365 584 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 GCNT3O95395 438 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 EPB41P11171 864 aaKnown RBP15.94■□□□□ 0.14
TDP2-201ENST00000341060 TAL1P17542 331 aaPredicted RBP15.94■□□□□ 0.14
TDP2-201ENST00000341060 ANXA13P27216 316 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 NNTQ13423 1086 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 DCAF17Q5H9S7 520 aaPredicted RBP15.94■□□□□ 0.14
TDP2-201ENST00000341060 SH3GL2Q99962 352 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 GDF3Q9NR23 364 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 PRR12Q9ULL5 1215 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 A0A1W2PRG0 241 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 GTPBP10A4D1E9 387 aaKnown RBP15.94■□□□□ 0.14
TDP2-201ENST00000341060 GAP43P17677 238 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 CHRNA5P30532 468 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 ZNF76P36508 570 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 STAT2P52630 851 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 RINT1Q6NUQ1 792 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 GBP6Q6ZN66 633 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 IFT20Q8IY31 132 aa15.94■□□□□ 0.14
TDP2-201ENST00000341060 RBM46Q8TBY0 533 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms