RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 MCF2L2Q86YR7 1114 aa17.05■□□□□ 0.32
MBD1-203ENST00000339998 GPRC5CQ9NQ84 441 aa17.05■□□□□ 0.32
MBD1-203ENST00000339998 PXMP2Q9NR77 195 aa17.05■□□□□ 0.32
MBD1-203ENST00000339998 ARHGAP20Q9P2F6 1191 aa17.05■□□□□ 0.32
MBD1-203ENST00000339998 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■□□□ 12
MBD1-203ENST00000339998 UBIAD1Q9Y5Z9 338 aa17.05■□□□□ 0.32
MBD1-203ENST00000339998 ENC1O14682 589 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 TGFB1I1O43294 461 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 CCNE2O96020 404 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 NPEPPSP55786 919 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 VGLL4Q14135 290 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 PLA2G4FQ68DD2 849 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 DAW1Q8N136 415 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 REPS2Q8NFH8 660 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 ANKRD7Q92527 254 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 FIZ1Q96SL8 496 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 NOL4O94818 638 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 SOX10P56693 466 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 SETQ01105 290 aaPredicted RBP17.04■□□□□ 0.32
MBD1-203ENST00000339998 TCERG1LQ5VWI1 586 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 PCNX4Q63HM2 1172 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 TRIM59Q8IWR1 403 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 RDH13Q8NBN7 331 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 LSM14BQ9BX40 385 aaKnown RBP17.04■□□□□ 0.32
MBD1-203ENST00000339998 JADE2Q9NQC1 790 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 DOCK1Q14185 1865 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 FGFR1OPO95684 399 aaKnown RBP17.04■□□□□ 0.32
MBD1-203ENST00000339998 KCNH2Q12809 1159 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 ODR4Q5SWX8 454 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 NACC1Q96RE7 527 aa17.04■□□□□ 0.32
MBD1-203ENST00000339998 GTPBP4Q9BZE4 634 aaKnown RBP17.04■□□□□ 0.32
MBD1-203ENST00000339998 DOCK5Q9H7D0 1870 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 RLFQ13129 1914 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 CETN3O15182 167 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 USO1O60763 962 aaKnown RBP17.03■□□□□ 0.32
MBD1-203ENST00000339998 HIP1RO75146 1068 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 YBX3P16989 372 aaKnown RBP eCLIP17.03■□□□□ 0.32
MBD1-203ENST00000339998 SLC9A1P19634 815 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 DSG3P32926 999 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 POLR2FP61218 127 aaKnown RBP17.03■□□□□ 0.32
MBD1-203ENST00000339998 MEA1Q16626 185 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 DNAAF5Q86Y56 855 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 BAP1Q92560 729 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 CLMNQ96JQ2 1002 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 ZMYM2Q9UBW7 1377 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 ARHGEF35A5YM69 484 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 KIF5CO60282 957 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 PARVGQ9HBI0 331 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 AS3MTQ9HBK9 375 aa17.03■□□□□ 0.32
MBD1-203ENST00000339998 MYH11P35749 1972 aa17.02■□□□□ 0.32
MBD1-203ENST00000339998 GOLGA6L9A6NEM1 432 aa17.02■□□□□ 0.32
MBD1-203ENST00000339998 RGS20O76081 388 aa17.02■□□□□ 0.32
MBD1-203ENST00000339998 NR3C1P04150 777 aa17.02■□□□□ 0.32
MBD1-203ENST00000339998 PADI6Q6TGC4 694 aa17.02■□□□□ 0.32
MBD1-203ENST00000339998 CACNA2D4Q7Z3S7 1137 aa17.02■□□□□ 0.32
MBD1-203ENST00000339998 ANKRD13CQ8N6S4 541 aa17.02■□□□□ 0.32
MBD1-203ENST00000339998 RIT2Q99578 217 aa17.02■□□□□ 0.32
MBD1-203ENST00000339998 NUP58Q9BVL2 599 aa17.02■□□□□ 0.32
MBD1-203ENST00000339998 HDAC6Q9UBN7 1215 aa17.02■□□□□ 0.32
MBD1-203ENST00000339998 AFG3L2Q9Y4W6 797 aa17.02■□□□□ 0.32
MBD1-203ENST00000339998 NR3C2P08235 984 aa17.02■□□□□ 0.31
MBD1-203ENST00000339998 MAPK7Q13164 816 aa17.02■□□□□ 0.31
MBD1-203ENST00000339998 FAM178BQ8IXR5 827 aa17.02■□□□□ 0.31
MBD1-203ENST00000339998 PDCL2Q8N4E4 241 aa17.02■□□□□ 0.31
MBD1-203ENST00000339998 ZSWIM2Q8NEG5 633 aa17.02■□□□□ 0.31
MBD1-203ENST00000339998 NEK11Q8NG66 645 aa17.02■□□□□ 0.31
MBD1-203ENST00000339998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.02■□□□□ 0.31
MBD1-203ENST00000339998 ERO1AQ96HE7 468 aa17.02■□□□□ 0.31
MBD1-203ENST00000339998 PUF60Q9UHX1 559 aaKnown RBP17.02■□□□□ 0.31
MBD1-203ENST00000339998 SNCAIPQ9Y6H5 919 aa17.02■□□□□ 0.31
MBD1-203ENST00000339998 MACROD2A1Z1Q3 448 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 SPDYE16A6NNV3 312 aaPredicted RBP17.01■□□□□ 0.31
MBD1-203ENST00000339998 EIF4A3P38919 411 aaKnown RBP17.01■□□□□ 0.31
MBD1-203ENST00000339998 CYP2J2P51589 502 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 CNTN2Q02246 1040 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 A1CFQ9NQ94 594 aaKnown RBP17.01■□□□□ 0.31
MBD1-203ENST00000339998 ZNHIT6Q9NWK9 470 aaKnown RBP17.01■□□□□ 0.31
MBD1-203ENST00000339998 TLR2O60603 784 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 PNMA6AP0CW24 399 aaPredicted RBP17.01■□□□□ 0.31
MBD1-203ENST00000339998 MAP3K9P80192 1104 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 CCDC122Q5T0U0 273 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 GJB7Q6PEY0 223 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 CATSPERGQ6ZRH7 1159 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 ZBTB9Q96C00 473 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 SPON1Q9HCB6 807 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 TRAF3IP3Q9Y228 551 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 PARP14Q460N5 1801 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 ZNF720Q7Z2F6 126 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 KIAA1328Q86T90 577 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 CEP63Q96MT8 703 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 KIFC3Q9BVG8 833 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 PCIF1Q9H4Z3 704 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 PLAGL2Q9UPG8 496 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 MRFAP1Q9Y605 127 aa17.01■□□□□ 0.31
MBD1-203ENST00000339998 FRMPD4Q14CM0 1322 aa17■□□□□ 0.31
MBD1-203ENST00000339998 BACH1O14867 736 aa17■□□□□ 0.31
MBD1-203ENST00000339998 GFPT1Q06210 699 aaPredicted RBP17■□□□□ 0.31
MBD1-203ENST00000339998 RETREG2Q8NC44 543 aa17■□□□□ 0.31
MBD1-203ENST00000339998 MNS1Q8NEH6 495 aa17■□□□□ 0.31
MBD1-203ENST00000339998 ZNF397Q8NF99 534 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms