RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 PLAGL2Q9UPG8 496 aa17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 CTDP1Q9Y5B0 961 aaPredicted RBP17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 SBF1O95248 1867 aa17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 TGFB1I1O43294 461 aa17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 LMNB1P20700 586 aa17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 CASP4P49662 377 aa17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 CYP27A1Q02318 531 aa17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 BAATQ14032 418 aaPredicted RBP17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 NIPA1Q7RTP0 329 aa17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 MIER3Q7Z3K6 550 aa17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 DAW1Q8N136 415 aa17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 KCTD17Q8N5Z5 321 aa17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 UPF1Q92900 1129 aaKnown RBP eCLIP17.92■□□□□ 0.463e-7■■■■□ 24.6
SCNN1A-202ENST00000338748 SH2D3AQ9BRG2 576 aa17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 AS3MTQ9HBK9 375 aa17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.92■□□□□ 0.46
SCNN1A-202ENST00000338748 TMEM150BA6NC51 233 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 CETN3O15182 167 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 CLIC2O15247 247 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 HNRNPH3P31942 346 aaKnown RBP17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 TMEM132BQ14DG7 1078 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 SNRNP48Q6IEG0 339 aaKnown RBP17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 RRAGAQ7L523 313 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 PDCL2Q8N4E4 241 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 ZNF397Q8NF99 534 aaPredicted RBP17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 C12orf42Q96LP6 360 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 LACRTQ9GZZ8 138 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 PARVGQ9HBI0 331 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 ZNHIT6Q9NWK9 470 aaKnown RBP17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 PDXKO00764 312 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 TADA3O75528 432 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 DDNO94850 711 aaPredicted RBP17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 GNA14O95837 355 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 ZNF131P52739 623 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 MAPK7Q13164 816 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 COG2Q14746 738 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 UGCGQ16739 394 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 PDCL3Q9H2J4 239 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 NLRC4Q9NPP4 1024 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 TYW1Q9NV66 732 aaKnown RBP17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 GUCA1BQ9UMX6 200 aa17.91■□□□□ 0.46
SCNN1A-202ENST00000338748 MYH11P35749 1972 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 PCNTO95613 3336 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 NR3C1P04150 777 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 GAP43P17677 238 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 MUTP22033 750 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 NEK11Q8NG66 645 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 LSM14BQ9BX40 385 aaKnown RBP17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 TESPA1A2RU30 521 aaPredicted RBP17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 PEX10O60683 326 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 CCNE2O96020 404 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 DSG3P32926 999 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 KCNH2Q12809 1159 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 MAEAQ7L5Y9 396 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 TRMT1LQ7Z2T5 733 aaKnown RBP17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 CNKSR2Q8WXI2 1034 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 ADAMTS5Q9UNA0 930 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 SAMM50Q9Y512 469 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 DUSP10Q9Y6W6 482 aa17.9■□□□□ 0.46
SCNN1A-202ENST00000338748 WDR90Q96KV7 1748 aa17.89■□□□□ 0.45
SCNN1A-202ENST00000338748 HIP1RO75146 1068 aa17.89■□□□□ 0.45
SCNN1A-202ENST00000338748 CDK17Q00537 523 aa17.89■□□□□ 0.45
SCNN1A-202ENST00000338748 ARHGEF16Q5VV41 709 aa17.89■□□□□ 0.45
SCNN1A-202ENST00000338748 PDXDC1Q6P996 788 aa17.89■□□□□ 0.45
SCNN1A-202ENST00000338748 MAP3K20Q9NYL2 800 aaKnown RBP17.89■□□□□ 0.45
SCNN1A-202ENST00000338748 AFG3L2Q9Y4W6 797 aa17.89■□□□□ 0.45
SCNN1A-202ENST00000338748 ARHGEF35A5YM69 484 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 EIF3CLB5ME19 914 aaKnown RBP17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 P4HBP07237 508 aaKnown RBP17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 CYLC1P35663 651 aaPredicted RBP17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 PPP2R3AQ06190 1150 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 ODR4Q5SWX8 454 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 FBXO38Q6PIJ6 1188 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 ZNF720Q7Z2F6 126 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 CCDC170Q8IYT3 715 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 IQCDQ96DY2 449 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 EIF3CQ99613 913 aaKnown RBP17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 TELO2Q9Y4R8 837 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 EIF3DO15371 548 aaKnown RBP eCLIP17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 CALUO43852 315 aaPredicted RBP17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 TLR2O60603 784 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 USP2O75604 605 aaPredicted RBP17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 GUCY2CP25092 1073 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 CCDC122Q5T0U0 273 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 PADI6Q6TGC4 694 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 CATSPERGQ6ZRH7 1159 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 FAM178BQ8IXR5 827 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 MNS1Q8NEH6 495 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 NEK9Q8TD19 979 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 MAP7D2Q96T17 732 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 FHDC1Q9C0D6 1143 aaPredicted RBP17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 EPC1Q9H2F5 836 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 ZSWIM4Q9H7M6 989 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 ARMCX3Q9UH62 379 aaPredicted RBP17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 LOXHD1Q8IVV2 1947 aa17.88■□□□□ 0.45
SCNN1A-202ENST00000338748 ADM5C9JUS6 153 aa17.87■□□□□ 0.45
SCNN1A-202ENST00000338748 ACTN1P12814 892 aa17.87■□□□□ 0.45
SCNN1A-202ENST00000338748 EIF4A3P38919 411 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms