RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 RSPH10BP0C881 870 aa12.76□□□□□ -0.37
SLC28A1-202ENST00000338602 ADAM17P78536 824 aa12.76□□□□□ -0.37
SLC28A1-202ENST00000338602 HIC1Q14526 733 aa12.76□□□□□ -0.37
SLC28A1-202ENST00000338602 BBXQ8WY36 941 aaPredicted RBP12.76□□□□□ -0.37
SLC28A1-202ENST00000338602 HERVK_113Q902F9 699 aa12.76□□□□□ -0.37
SLC28A1-202ENST00000338602 UNC45AQ9H3U1 944 aa12.76□□□□□ -0.37
SLC28A1-202ENST00000338602 KCNMB3Q9NPA1 279 aa12.76□□□□□ -0.37
SLC28A1-202ENST00000338602 MTMR10Q9NXD2 777 aa12.76□□□□□ -0.37
SLC28A1-202ENST00000338602 KAT6AQ92794 2004 aa12.76□□□□□ -0.37
SLC28A1-202ENST00000338602 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 ZBBXA8MT70 800 aa12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 M0QZ92 97 aa12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 NEMFO60524 1076 aa12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 CD2BP2O95400 341 aaKnown RBP12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 GJB2P29033 226 aa12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 ORC2Q13416 577 aaPredicted RBP12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 CALCRLQ16602 461 aa12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 TRIM71Q2Q1W2 868 aaKnown RBP12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 EARS2Q5JPH6 523 aaKnown RBP12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 ZNF618Q5T7W0 954 aa12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 C16orf59Q7L2K0 433 aa12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 OTOP2Q7RTS6 562 aa12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 RPAINQ86UA6 219 aa12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 SLC4A7Q9Y6M7 1214 aa12.75□□□□□ -0.37
SLC28A1-202ENST00000338602 MBLAC1A4D2B0 266 aaPredicted RBP12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 FAM205CA6NFA0 338 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 EFCAB14O75071 495 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 BAIAP3O94812 1187 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 ATP2B1P20020 1258 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 TRAPPC10P48553 1259 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 SMAD3P84022 425 aaKnown RBP12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 PPP2R5CQ13362 524 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 IER5Q5VY09 327 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 MCTP1Q6DN14 999 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 CNKSR3Q6P9H4 555 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 NOSTRINQ8IVI9 506 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 NME8Q8N427 588 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 GJA10Q969M2 543 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 PCDHA12Q9UN75 941 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 PCDHA2Q9Y5H9 948 aa12.74□□□□□ -0.37
SLC28A1-202ENST00000338602 IGSF9BQ9UPX0 1349 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 SMIM35A0A1B0GVV1 85 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 MAGEB2O15479 319 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 CXCL10P02778 98 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 OATP04181 439 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 CTSHP09668 335 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 COL9A1P20849 921 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 PDCP20941 246 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 KLRC1P26715 233 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 KCNJ6P48051 423 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 IKBKEQ14164 716 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 XKR3Q5GH77 459 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 MARCH8Q5T0T0 291 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 MTHFD1LQ6UB35 978 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 TRMT1LQ7Z2T5 733 aaKnown RBP12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 DNAJB3Q8WWF6 145 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 SEPT8Q92599 483 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 WNT8BQ93098 351 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 FAM49AQ9H0Q0 323 aaPredicted RBP12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 TSHZ2Q9NRE2 1034 aa12.73□□□□□ -0.37
SLC28A1-202ENST00000338602 ABHD14A-ACY1A0A1B0GW23 586 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 ATP4AP20648 1035 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 U2AF2P26368 475 aaKnown RBP eCLIP12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 TMOD1P28289 359 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 MCM7P33993 719 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 QARSP47897 775 aaKnown RBP12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 PSMC5P62195 406 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 PRKCEQ02156 737 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 EPHA7Q15375 998 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 FAM26DQ5JW98 314 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 TTC38Q5R3I4 469 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 RASIP1Q5U651 963 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 LARP1BQ659C4 914 aaKnown RBP12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 NCAPH2Q6IBW4 605 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 B3GNT9Q6UX72 402 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 RUFY4Q6ZNE9 571 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 HAS1Q92839 578 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 TRIP12Q14669 1992 aaPredicted RBP12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 TTC28Q96AY4 2481 aa12.72□□□□□ -0.37
SLC28A1-202ENST00000338602 NBNO60934 754 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 P4HBP07237 508 aaKnown RBP12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 TXKP42681 527 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 MRPS6P82932 125 aaKnown RBP12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 CUL4AQ13619 759 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 RAB30Q15771 203 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 TRAF7Q6Q0C0 670 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 EXOC8Q8IYI6 725 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 ZNF710Q8N1W2 664 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 METTL13Q8N6R0 699 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 USP38Q8NB14 1042 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 PHOSPHO2Q8TCD6 241 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 TRAPPC12Q8WVT3 735 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 APBB2Q92870 758 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 SLC9A7Q96T83 725 aa12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 JPH2Q9BR39 696 aaPredicted RBP12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 TTC12Q9H892 705 aaPredicted RBP12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 SEPT9Q9UHD8 586 aaPredicted RBP12.71□□□□□ -0.37
SLC28A1-202ENST00000338602 MSRAQ9UJ68 235 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms