RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 CAPNS2Q96L46 248 aa16.32■□□□□ 0.2
CBX3-201ENST00000337620 SH2D3AQ9BRG2 576 aa16.32■□□□□ 0.2
CBX3-201ENST00000337620 HSD3B7Q9H2F3 369 aa16.32■□□□□ 0.2
CBX3-201ENST00000337620 DBR1Q9UK59 544 aaKnown RBP16.32■□□□□ 0.2
CBX3-201ENST00000337620 DIS3Q9Y2L1 958 aaKnown RBP16.32■□□□□ 0.2
CBX3-201ENST00000337620 SYNGAP1Q96PV0 1343 aa16.32■□□□□ 0.2
CBX3-201ENST00000337620 RSPH10B2B2RC85 870 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 DKC1O60832 514 aaKnown RBP eCLIP16.31■□□□□ 0.2
CBX3-201ENST00000337620 TBCAO75347 108 aaKnown RBP16.31■□□□□ 0.2
CBX3-201ENST00000337620 RSPH10BP0C881 870 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 TTLL4Q14679 1199 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 LRRC41Q15345 812 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 FAM26FQ5R3K3 315 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 SPATA1Q5VX52 437 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 PADI6Q6TGC4 694 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 METTL7BQ6UX53 244 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 NPLOC4Q8TAT6 608 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 SCFD2Q8WU76 684 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 PPP1R9BQ96SB3 815 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 CREBZFQ9NS37 354 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.31■□□□□ 0.2
CBX3-201ENST00000337620 FRMD3A2A2Y4 597 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 SFI1A8K8P3 1242 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 ATP1A3P13637 1013 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 RARRES1P49788 294 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 APLP1P51693 650 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 CELF3Q5SZQ8 465 aaKnown RBP16.31■□□□□ 0.2
CBX3-201ENST00000337620 MORN1Q5T089 497 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 DHX37Q8IY37 1157 aaKnown RBP16.31■□□□□ 0.2
CBX3-201ENST00000337620 DHTKD1Q96HY7 919 aaPredicted RBP16.31■□□□□ 0.2
CBX3-201ENST00000337620 SAMSN1Q9NSI8 373 aaKnown RBP16.31■□□□□ 0.2
CBX3-201ENST00000337620 KCND2Q9NZV8 630 aa16.31■□□□□ 0.2
CBX3-201ENST00000337620 ZNF862O60290 1169 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 ATG7O95352 703 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 ALDH1A1P00352 501 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 CDK11BP21127 795 aaKnown RBP16.3■□□□□ 0.2
CBX3-201ENST00000337620 PPP1R2P41236 205 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 MAP2K5Q13163 448 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 XKR9Q5GH70 373 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 TMEM63BQ5T3F8 832 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 PLA2G4FQ68DD2 849 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 CCDC62Q6P9F0 684 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 SARM1Q6SZW1 724 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 MAMDC4Q6UXC1 1216 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 GLIS3Q8NEA6 775 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 COPS5Q92905 334 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 PDLIM2Q96JY6 352 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 TINF2Q9BSI4 451 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 VTA1Q9NP79 307 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 ZNF302Q9NR11 478 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 COL4A3BPQ9Y5P4 624 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 GSTTP1A0A1W2PQM5 241 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 TRIM49BA6NDI0 452 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 RASSF10A6NK89 507 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 FAM13AO94988 1023 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 SNAI1O95863 264 aaPredicted RBP16.3■□□□□ 0.2
CBX3-201ENST00000337620 ZNF75DP51815 510 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 NPEPPSP55786 919 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 TAPT1Q6NXT6 567 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 ANO5Q75V66 913 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 MAEAQ7L5Y9 396 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 OTUD6AQ7L8S5 288 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 SFR1Q86XK3 245 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 SEPT1Q8WYJ6 367 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 ANKEF1Q9NU02 776 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 PCDHA2Q9Y5H9 948 aa16.3■□□□□ 0.2
CBX3-201ENST00000337620 NOP56O00567 594 aaKnown RBP16.29■□□□□ 0.2
CBX3-201ENST00000337620 TNPO2O14787 897 aaKnown RBP16.29■□□□□ 0.2
CBX3-201ENST00000337620 USO1O60763 962 aaKnown RBP16.29■□□□□ 0.2
CBX3-201ENST00000337620 PMS1P54277 932 aaKnown RBP16.29■□□□□ 0.2
CBX3-201ENST00000337620 PRKCEQ02156 737 aa16.29■□□□□ 0.2
CBX3-201ENST00000337620 COBLL1Q53SF7 1204 aa16.29■□□□□ 0.2
CBX3-201ENST00000337620 MYCT1Q8N699 235 aa16.29■□□□□ 0.2
CBX3-201ENST00000337620 P2RX5Q93086 422 aa16.29■□□□□ 0.2
CBX3-201ENST00000337620 SPATA33Q96N06 139 aa16.29■□□□□ 0.2
CBX3-201ENST00000337620 FGFBP2Q9BYJ0 223 aa16.29■□□□□ 0.2
CBX3-201ENST00000337620 DOCK3Q8IZD9 2030 aa16.29■□□□□ 0.2
CBX3-201ENST00000337620 LOXHD1Q8IVV2 1947 aa16.29■□□□□ 0.2
CBX3-201ENST00000337620 SERPINC1P01008 464 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 CCNE1P24864 410 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 GUCY2CP25092 1073 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 TCF7P36402 384 aaPredicted RBP16.28■□□□□ 0.2
CBX3-201ENST00000337620 FANCCQ00597 558 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 HSDL1Q3SXM5 330 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 MYOCDQ8IZQ8 938 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 GUF1Q8N442 669 aaKnown RBP16.28■□□□□ 0.2
CBX3-201ENST00000337620 CEP170P1Q96L14 293 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 SEPT9Q9UHD8 586 aaPredicted RBP16.28■□□□□ 0.2
CBX3-201ENST00000337620 MAFBQ9Y5Q3 323 aaPredicted RBP16.28■□□□□ 0.2
CBX3-201ENST00000337620 HIP1RO75146 1068 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 GAP43P17677 238 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 CYP2B6P20813 491 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 PTGS1P23219 599 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 TRIM47Q96LD4 638 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 GPR20Q99678 358 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 KATNBL1Q9H079 304 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 MRPL44Q9H9J2 332 aaKnown RBP16.28■□□□□ 0.2
CBX3-201ENST00000337620 PARVGQ9HBI0 331 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 IFNKQ9P0W0 207 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 ZHX1Q9UKY1 873 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms