RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 SPIRE1Q08AE8 756 aa11.07□□□□□ -0.64
HIF1A-202ENST00000337138 TCP10Q12799 353 aa11.07□□□□□ -0.64
HIF1A-202ENST00000337138 PABPC4Q13310 644 aaKnown RBP eCLIP11.07□□□□□ -0.648e-8■□□□□ 10.9
HIF1A-202ENST00000337138 ORC2Q13416 577 aaPredicted RBP11.07□□□□□ -0.64
HIF1A-202ENST00000337138 ASIC2Q16515 512 aa11.07□□□□□ -0.64
HIF1A-202ENST00000337138 USH1GQ495M9 461 aa11.07□□□□□ -0.64
HIF1A-202ENST00000337138 TBC1D10BQ4KMP7 808 aaPredicted RBP11.07□□□□□ -0.64
HIF1A-202ENST00000337138 MAEAQ7L5Y9 396 aa11.07□□□□□ -0.64
HIF1A-202ENST00000337138 RNPC3Q96LT9 517 aaKnown RBP11.07□□□□□ -0.64
HIF1A-202ENST00000337138 A0A087X0T9 212 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 GPR75-ASB3A0A0A6YYF3 556 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 POTECB2RU33 542 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 CHMP2AO43633 222 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 FAM228BP0C875 321 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 RPS6KA1Q15418 735 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 TTMPQ5BVD1 217 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 MFSD14BQ5SR56 506 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 KLHDC7AQ5VTJ3 777 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 DYDC1Q8WWB3 177 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 KCTD10Q9H3F6 313 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 GOLGA8KD6RF30 607 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 KIF4AO95239 1232 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 TMOD1P28289 359 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 PAK2Q13177 524 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 MICAL1Q8TDZ2 1067 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 DDX25Q9UHL0 483 aaKnown RBP11.06□□□□□ -0.64
HIF1A-202ENST00000337138 PLAAQ9Y263 795 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 MYH11P35749 1972 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 HNRNPH1P31943 449 aaKnown RBP11.06□□□□□ -0.64
HIF1A-202ENST00000337138 CTNNA1P35221 906 aaKnown RBP11.06□□□□□ -0.64
HIF1A-202ENST00000337138 ZNF772Q68DY9 489 aaPredicted RBP11.06□□□□□ -0.64
HIF1A-202ENST00000337138 ARHGAP27Q6ZUM4 889 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 ZNF287Q9HBT7 754 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 COL4A3BPQ9Y5P4 624 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 BPTFQ12830 3046 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 DOCK5Q9H7D0 1870 aa11.06□□□□□ -0.64
HIF1A-202ENST00000337138 TRIM37O94972 964 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 KIRREL3Q8IZU9 778 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 RPGRQ92834 1020 aaKnown RBP11.05□□□□□ -0.64
HIF1A-202ENST00000337138 SYT11Q9BT88 431 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 PAGR1Q9BTK6 254 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 ANKRD2Q9GZV1 360 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 GDF3Q9NR23 364 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 ATP8B3O60423 1300 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 EIF3HO15372 352 aaKnown RBP eCLIP11.05□□□□□ -0.64
HIF1A-202ENST00000337138 NR1D1P20393 614 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 CACNB3P54284 484 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 GTF2IP78347 998 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 NEDD9Q14511 834 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 GJB7Q6PEY0 223 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 U2AF1L4Q8WU68 220 aaKnown RBP11.05□□□□□ -0.64
HIF1A-202ENST00000337138 CAVIN3Q969G5 261 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 CHORDC1Q9UHD1 332 aaPredicted RBP11.05□□□□□ -0.64
HIF1A-202ENST00000337138 RAD51CO43502 376 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 BUB1BO60566 1050 aaPredicted RBP11.05□□□□□ -0.64
HIF1A-202ENST00000337138 LDHCP07864 332 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 SLC9A1P19634 815 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 NR2F2P24468 414 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 RFC4P35249 363 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 ZNF76P36508 570 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 FKBP3Q00688 224 aaKnown RBP11.05□□□□□ -0.64
HIF1A-202ENST00000337138 COASYQ13057 564 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 PDXDC1Q6P996 788 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 UNC13DQ70J99 1090 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 IQCKQ8N0W5 287 aa11.05□□□□□ -0.64
HIF1A-202ENST00000337138 POTEFA5A3E0 1075 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 EIF4E1BA6NMX2 242 aaKnown RBP11.04□□□□□ -0.64
HIF1A-202ENST00000337138 H0YGN5 161 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 KRIT1O00522 736 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 POTEIP0CG38 1075 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 PRR16Q569H4 304 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 POTEEQ6S8J3 1075 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 DAAM2Q86T65 1068 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 NEDD1Q8NHV4 660 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 BORCS6Q96GS4 357 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 RSRC1Q96IZ7 334 aaKnown RBP11.04□□□□□ -0.64
HIF1A-202ENST00000337138 SELENOSQ9BQE4 189 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 MXD3Q9BW11 206 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 YY1AP1Q9H869 796 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 CD248Q9HCU0 757 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 PKD2L1Q9P0L9 805 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 RTCBQ9Y3I0 505 aaKnown RBP11.04□□□□□ -0.64
HIF1A-202ENST00000337138 NFS1Q9Y697 457 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 KRT13P13646 458 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 TNNC1P63316 161 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 MAP2K1Q02750 393 aaPredicted RBP11.04□□□□□ -0.64
HIF1A-202ENST00000337138 ARHGAP44Q17R89 818 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 WDR66Q8TBY9 1149 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 CASKIN2Q8WXE0 1202 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 AMACRQ9UHK6 382 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 KRT71Q3SY84 523 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 EPM2AIP1Q7L775 607 aaPredicted RBP11.04□□□□□ -0.64
HIF1A-202ENST00000337138 PEX26Q7Z412 305 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 SEC14L1Q92503 715 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 CELF4Q9BZC1 486 aaKnown RBP11.04□□□□□ -0.64
HIF1A-202ENST00000337138 IKZF4Q9H2S9 585 aa11.04□□□□□ -0.64
HIF1A-202ENST00000337138 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms