RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 POTEBQ6S5H4 581 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 C7orf25Q9BPX7 421 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 MAN1B1Q9UKM7 699 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 GLTPD2A6NH11 291 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 RNF8O76064 485 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 PRPF6O94906 941 aaKnown RBP7.49□□□□□ -1.21
SF3B1-201ENST00000335508 KCNJ6P48051 423 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 PTPAQ15257 358 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 RPS6KA1Q15418 735 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 KNOP1Q1ED39 458 aaKnown RBP7.49□□□□□ -1.21
SF3B1-201ENST00000335508 KMT5BQ4FZB7 885 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 EEPD1Q7L9B9 569 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 CCDC26Q8TAB7 109 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 SENP7Q9BQF6 1050 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 GABBR1Q9UBS5 961 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 MYO5BQ9ULV0 1848 aa7.49□□□□□ -1.21
SF3B1-201ENST00000335508 HBP1O60381 514 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 VCAM1P19320 739 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 DNA2P51530 1060 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 ZNF569Q5MCW4 686 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 C10orf76Q5T2E6 689 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 VSTM4Q8IW00 320 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 ADSSL1Q8N142 457 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 E9PMD0 336 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 MYO1FO00160 1098 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 ZNF157P51786 506 aaPredicted RBP7.48□□□□□ -1.21
SF3B1-201ENST00000335508 LACTBP83111 547 aaPredicted RBP7.48□□□□□ -1.21
SF3B1-201ENST00000335508 UQCRHLA0A096LP55 91 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 UQCRHP07919 91 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 EZRP15311 586 aaKnown RBP7.48□□□□□ -1.21
SF3B1-201ENST00000335508 SFR1Q86XK3 245 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.48□□□□□ -1.21
SF3B1-201ENST00000335508 ZNF302Q9NR11 478 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 FAM217BQ9NTX9 383 aaPredicted RBP7.48□□□□□ -1.21
SF3B1-201ENST00000335508 TPRP12270 2363 aaKnown RBP7.48□□□□□ -1.21
SF3B1-201ENST00000335508 RRN3P2A6NIE6 340 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 MEIS1O00470 390 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 DLATP10515 647 aaKnown RBP7.48□□□□□ -1.21
SF3B1-201ENST00000335508 SEL1L2Q5TEA6 688 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 KCNH7Q9NS40 1196 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 GDAQ9Y2T3 454 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 ZNF500O60304 480 aaPredicted RBP7.48□□□□□ -1.21
SF3B1-201ENST00000335508 GH1P01241 217 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 DSG3P32926 999 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 IFFO1Q0D2I5 559 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 KBTBD4Q9NVX7 518 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 FAM198AQ9UFP1 575 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 HPSEQ9Y251 543 aa7.48□□□□□ -1.21
SF3B1-201ENST00000335508 KIF28PB7ZC32 967 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 NR3C1P04150 777 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 KRT19P08727 400 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 MYZAPP0CAP1 466 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 ZSCAN20P17040 1043 aaPredicted RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 PEX3P56589 373 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 HERVK_113P62684 666 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 PEX26Q7Z412 305 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 MAP7D3Q8IWC1 876 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 GABPB2Q8TAK5 448 aaPredicted RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 MMP19Q99542 508 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 KATNAL1Q9BW62 490 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 MTIF3Q9H2K0 278 aaKnown RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 SENP2Q9HC62 589 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 ERAP1Q9NZ08 941 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 KRT5P13647 590 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 MYO1EQ12965 1108 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 ZRSR2Q15696 482 aaKnown RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 ZNF667Q5HYK9 610 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 KRT39Q6A163 491 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 SYTL5Q8TDW5 730 aaPredicted RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 EIF2AK1Q9BQI3 630 aaKnown RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 SLC38A10Q9HBR0 1119 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 PRMT7Q9NVM4 692 aaPredicted RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 AKT3Q9Y243 479 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 P4HA2O15460 535 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 SART1O43290 800 aaKnown RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 PTPRAP18433 802 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 CTTNQ14247 550 aaKnown RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 CFAP221Q4G0U5 840 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 ARMCX2Q7L311 632 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 POTEDQ86YR6 584 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 GLT1D1Q96MS3 346 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 SPATC1LQ9H0A9 340 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 CCDC113Q9H0I3 377 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 KCNH4Q9UQ05 1017 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 COL14A1Q05707 1796 aaKnown RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 SPDYE5A6NIY4 337 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 IER5Q5VY09 327 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 ZNF365Q70YC5 407 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 PANX2Q96RD6 677 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 ABHD16BQ9H3Z7 469 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 IL17RBQ9NRM6 502 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 DONSONQ9NYP3 566 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 MAD2L2Q9UI95 211 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 UBE2Q2LH0YL09 131 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 TLR3O15455 904 aaKnown RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 GFPT2O94808 682 aa7.47□□□□□ -1.21
SF3B1-201ENST00000335508 NFX1Q12986 1120 aaKnown RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 MRPL47Q9HD33 250 aaKnown RBP7.47□□□□□ -1.21
SF3B1-201ENST00000335508 ROBO3Q96MS0 1386 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms