RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 POM121Q96HA1 1249 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 GLT1D1Q96MS3 346 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 SPATC1LQ9H0A9 340 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 ZBTB3Q9H5J0 574 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 SUGCTQ9HAC7 445 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 ANAPC4Q9UJX5 808 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 ZMIZ1Q9ULJ6 1067 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 B8ZZF3 427 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 USP17L12C9JPN9 530 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 USP17L21D6R901 530 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 K7ESF4 209 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 MAFGO15525 162 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 PCDHGA12O60330 932 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 TBX10O75333 385 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 GNAT1P11488 350 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 CR2P20023 1033 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 RAB27AP51159 221 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 ARSDP51689 593 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 VCPP55072 806 aaKnown RBP1.95□□□□□ -2.1
LINC00643-201ENST00000334389 ADORA2A-AS1P86434 159 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 IKBKEQ14164 716 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 COG2Q14746 738 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 EPC2Q52LR7 807 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 N4BP2L1Q5TBK1 243 aaPredicted RBP1.95□□□□□ -2.1
LINC00643-201ENST00000334389 CCDC62Q6P9F0 684 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 RHBDF2Q6PJF5 856 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 SLC36A4Q6YBV0 504 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 MCM10Q7L590 875 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 FRMD5Q7Z6J6 570 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 ZNF843Q8N446 348 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 CNNM3Q8NE01 707 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 CELF1Q92879 486 aaKnown RBP1.95□□□□□ -2.1
LINC00643-201ENST00000334389 MTMR8Q96EF0 704 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 ZBP1Q9H171 429 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 DUSP15Q9H1R2 295 aaPredicted RBP1.95□□□□□ -2.1
LINC00643-201ENST00000334389 COPRSQ9NQ92 184 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 A1CFQ9NQ94 594 aaKnown RBP1.95□□□□□ -2.1
LINC00643-201ENST00000334389 DLL4Q9NR61 685 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 RGS18Q9NS28 235 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 FLRT1Q9NZU1 646 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 ZBTB21Q9ULJ3 1066 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 PPP1R9AQ9ULJ8 1098 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 PCDHGA8Q9Y5G5 932 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 PCDHGA7Q9Y5G6 932 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 UBE4BO95155 1302 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 PLXNA2O75051 1894 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 ABCA12Q86UK0 2595 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 MAGEB6P1A0A0J9YX57 407 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 ESYT2A0FGR8 921 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 EPOPA6NHQ4 379 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 NEURL1BA8MQ27 555 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 SNAI1O95863 264 aaPredicted RBP1.95□□□□□ -2.1
LINC00643-201ENST00000334389 CNPP09543 421 aaKnown RBP1.95□□□□□ -2.1
LINC00643-201ENST00000334389 KLRK1P26718 216 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 SMARCB1Q12824 385 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 PTPAQ15257 358 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 INAQ16352 499 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 BMT2Q1RMZ1 405 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 CDC42EP5Q6NZY7 148 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 ZNF365Q70YC5 407 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 NPLOC4Q8TAT6 608 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 SEPT8Q92599 483 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 NXPE2Q96DL1 559 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 HIC2Q96JB3 615 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 PRMT6Q96LA8 375 aaPredicted RBP1.95□□□□□ -2.1
LINC00643-201ENST00000334389 HEXIM2Q96MH2 286 aaKnown RBP1.95□□□□□ -2.1
LINC00643-201ENST00000334389 DPYSL5Q9BPU6 564 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 CARD11Q9BXL7 1154 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 USP26Q9BXU7 913 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 SPRTNQ9H040 489 aaPredicted RBP1.95□□□□□ -2.1
LINC00643-201ENST00000334389 RANBP17Q9H2T7 1088 aaKnown RBP1.95□□□□□ -2.1
LINC00643-201ENST00000334389 ATP13A2Q9NQ11 1180 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 EMILIN3Q9NT22 766 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 ZNHIT2Q9UHR6 403 aa1.95□□□□□ -2.1
LINC00643-201ENST00000334389 CCDC171Q6TFL3 1326 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 ABCA2Q9BZC7 2435 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 SHISA7A6NL88 538 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 PLD2O14939 933 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 JAK2O60674 1132 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 ZNF623O75123 536 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 SNHG28P0DPA3 235 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 FCER1AP12319 257 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 ZAP70P43403 619 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 RFX5P48382 616 aaPredicted RBP1.94□□□□□ -2.1
LINC00643-201ENST00000334389 YBX1P67809 324 aaKnown RBP1.94□□□□□ -2.1
LINC00643-201ENST00000334389 BMS1Q14692 1282 aaKnown RBP1.94□□□□□ -2.1
LINC00643-201ENST00000334389 RALBP1Q15311 655 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 BRDTQ58F21 947 aaPredicted RBP1.94□□□□□ -2.1
LINC00643-201ENST00000334389 LRRC8DQ7L1W4 858 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 RAVER1Q8IY67 606 aaKnown RBP1.94□□□□□ -2.1
LINC00643-201ENST00000334389 KDM1BQ8NB78 822 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 RDM1Q8NG50 284 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 SPPL3Q8TCT6 385 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 C2orf15Q8WU43 125 aaKnown RBP1.94□□□□□ -2.1
LINC00643-201ENST00000334389 DCAF4Q8WV16 495 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 WRNIP1Q96S55 665 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 PDCD2LQ9BRP1 358 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 BTBD1Q9H0C5 482 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 GGNBP2Q9H3C7 697 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 HIPK3Q9H422 1215 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms