RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 FAM207AQ9NSI2 230 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-201ENST00000334136 TBC1D7Q9P0N9 293 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 CCDC151A5D8V7 595 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 WDR64B1ANS9 1081 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 TMOD1P28289 359 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 NOL9Q5SY16 702 aaKnown RBP12.92□□□□□ -0.34
HDAC6-201ENST00000334136 TREML2Q5T2D2 321 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 FAM102BQ5T8I3 360 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 KCNV1Q6PIU1 500 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 ACRBPQ8NEB7 543 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 OR8K1Q8NGG5 319 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 CEP170P1Q96L14 293 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 POTEMA6NI47 508 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 MYO1CO00159 1063 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 PTPREP23469 700 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 RGS2P41220 211 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 PRELPP51888 382 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 GNGT1P63211 74 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 UBLCP1Q8WVY7 318 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-201ENST00000334136 MOV10L1Q9BXT6 1211 aaKnown RBP12.92□□□□□ -0.34
HDAC6-201ENST00000334136 MAP3K20Q9NYL2 800 aaKnown RBP12.92□□□□□ -0.34
HDAC6-201ENST00000334136 KCNG1Q9UIX4 513 aa12.92□□□□□ -0.34
HDAC6-201ENST00000334136 IKBKBO14920 756 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 STRNO43815 780 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 JAK3P52333 1124 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 CETN1Q12798 172 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 SLC7A3Q8WY07 619 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 EPSTI1Q96J88 318 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 MAGEA1P43355 309 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 STRN3Q13033 797 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 CTTNQ14247 550 aaKnown RBP12.91□□□□□ -0.34
HDAC6-201ENST00000334136 ARFGAP2Q8N6H7 521 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 TBC1D5Q92609 795 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 LARP4BQ92615 738 aaKnown RBP12.91□□□□□ -0.34
HDAC6-201ENST00000334136 TRIM31Q9BZY9 425 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 DISC1Q9NRI5 854 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 LARSQ9P2J5 1176 aaKnown RBP12.91□□□□□ -0.34
HDAC6-201ENST00000334136 SPDYE16A6NNV3 312 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-201ENST00000334136 BTBD19C9JJ37 291 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 MYZAPP0CAP1 466 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 HARSP12081 509 aaKnown RBP12.91□□□□□ -0.34
HDAC6-201ENST00000334136 MARK3P27448 753 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 RBL2Q08999 1139 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 RRP1BQ14684 758 aaKnown RBP12.91□□□□□ -0.34
HDAC6-201ENST00000334136 PTPROQ16827 1216 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 KCTD16Q68DU8 428 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 TYW1BQ6NUM6 668 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 KLHL7Q8IXQ5 586 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 SAMD3Q8N6K7 520 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 RANBP17Q9H2T7 1088 aaKnown RBP12.91□□□□□ -0.34
HDAC6-201ENST00000334136 MRPL44Q9H9J2 332 aaKnown RBP12.91□□□□□ -0.34
HDAC6-201ENST00000334136 MYPNQ86TC9 1320 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 CACNA1SQ13698 1873 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 WHAMMP3Q1A5X7 153 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 MTERF2Q49AM1 385 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 XRRA1Q6P2D8 792 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 B4GALNT4Q76KP1 1039 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 VSTM4Q8IW00 320 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 DEPTORQ8TB45 409 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 SYTL5Q8TDW5 730 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-201ENST00000334136 ZBED3Q96IU2 234 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-201ENST00000334136 CAPN7Q9Y6W3 813 aa12.91□□□□□ -0.34
HDAC6-201ENST00000334136 CCDC88AQ3V6T2 1871 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 IGKV6D-41A0A0C4DH26 115 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 BICDL2A1A5D9 508 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 GGPS1O95749 300 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 KRT13P13646 458 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 GUCY2FP51841 1108 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 RAPGEF1Q13905 1077 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 TRIM14Q14142 442 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 BTNL9Q6UXG8 535 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 USP37Q86T82 979 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 SCFD2Q8WU76 684 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 SPATA33Q96N06 139 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 JPH2Q9BR39 696 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-201ENST00000334136 EPN1Q9Y6I3 576 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-201ENST00000334136 MYL3P08590 195 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 PSMC4P43686 418 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 NAA25Q14CX7 972 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 ARMCX5Q6P1M9 558 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 DAGLBQ8NCG7 672 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 SELENOOQ9BVL4 669 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 ABCB6Q9NP58 842 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 DYNC1LI2O43237 492 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-201ENST00000334136 GCNT3O95395 438 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 IRX5P78411 483 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-201ENST00000334136 E4F1Q66K89 784 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-201ENST00000334136 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 PAIP2Q9BPZ3 127 aaKnown RBP12.9□□□□□ -0.34
HDAC6-201ENST00000334136 MXRA8Q9BRK3 442 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 IRX2Q9BZI1 471 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-201ENST00000334136 CUEDC2Q9H467 287 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 NLRC4Q9NPP4 1024 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 PPANQ9NQ55 473 aaKnown RBP12.9□□□□□ -0.34
HDAC6-201ENST00000334136 KCNH4Q9UQ05 1017 aa12.9□□□□□ -0.34
HDAC6-201ENST00000334136 N4BP2Q86UW6 1770 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-201ENST00000334136 SFNP31947 248 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 PPP1R2P41236 205 aa12.89□□□□□ -0.35
HDAC6-201ENST00000334136 MRPS25P82663 173 aaKnown RBP12.89□□□□□ -0.35
HDAC6-201ENST00000334136 PPFIA1Q13136 1202 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms