RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 PRPF38AQ8NAV1 312 aaKnown RBP19.15■□□□□ 0.66
DDX28-201ENST00000332395 LPAR1Q92633 364 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 HOOK2Q96ED9 719 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 ANO9A1A5B4 782 aa19.14■□□□□ 0.65
DDX28-201ENST00000332395 POTEB2H3BUK9 544 aa19.14■□□□□ 0.65
DDX28-201ENST00000332395 IPO5O00410 1097 aaKnown RBP19.14■□□□□ 0.65
DDX28-201ENST00000332395 FAM13AO94988 1023 aa19.14■□□□□ 0.65
DDX28-201ENST00000332395 POLD1P28340 1107 aa19.14■□□□□ 0.65
DDX28-201ENST00000332395 ZNF280AP59817 542 aaPredicted RBP19.14■□□□□ 0.65
DDX28-201ENST00000332395 TNIP1Q15025 636 aa19.14■□□□□ 0.65
DDX28-201ENST00000332395 SFMBT2Q5VUG0 894 aa19.14■□□□□ 0.65
DDX28-201ENST00000332395 MSANTD4Q8NCY6 345 aa19.14■□□□□ 0.65
DDX28-201ENST00000332395 MXRA8Q9BRK3 442 aa19.14■□□□□ 0.65
DDX28-201ENST00000332395 TEKT3Q9BXF9 490 aa19.14■□□□□ 0.65
DDX28-201ENST00000332395 WRAP73Q9P2S5 460 aaPredicted RBP19.14■□□□□ 0.65
DDX28-201ENST00000332395 NFIBO00712 420 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 NR3C1P04150 777 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 APBA1Q02410 837 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 KCNA1Q09470 495 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 FRMPD4Q14CM0 1322 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 EPHA7Q15375 998 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 TDRD12Q587J7 1177 aaKnown RBP19.13■□□□□ 0.65
DDX28-201ENST00000332395 B3GNT9Q6UX72 402 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 NACC1Q96RE7 527 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 ARFGAP3Q9NP61 516 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 COL20A1Q9P218 1284 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 RPTORQ8N122 1335 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 CCDC151A5D8V7 595 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 TLR2O60603 784 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 ZBTB7AO95365 584 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 RPL13P26373 211 aaKnown RBP19.13■□□□□ 0.65
DDX28-201ENST00000332395 SLC9C1Q4G0N8 1177 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 MYCT1Q8N699 235 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 CLEC4DQ8WXI8 215 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 KIAA1683Q9H0B3 1180 aa19.13■□□□□ 0.65
DDX28-201ENST00000332395 NFKBIEO00221 500 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 EIF3DO15371 548 aaKnown RBP eCLIP19.12■□□□□ 0.65
DDX28-201ENST00000332395 AKAP3O75969 853 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 SERPING1P05155 500 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 ITGB5P18084 799 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 GFPT1Q06210 699 aaPredicted RBP19.12■□□□□ 0.65
DDX28-201ENST00000332395 BRD3Q15059 726 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 TRIM58Q8NG06 486 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 RIT2Q99578 217 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 GANQ9H2C0 597 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 PARVGQ9HBI0 331 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 ATP8B1O43520 1251 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 SRGAP2O75044 1071 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 AFPP02771 609 aaKnown RBP19.12■□□□□ 0.65
DDX28-201ENST00000332395 XRCC5P13010 732 aaKnown RBP19.12■□□□□ 0.65
DDX28-201ENST00000332395 MAGEA1P43355 309 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 DGKZQ13574 1117 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 CPXCR1Q8N123 301 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 LXNQ9BS40 222 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 CAPN6Q9Y6Q1 641 aa19.12■□□□□ 0.65
DDX28-201ENST00000332395 SLC16A3O15427 465 aaKnown RBP19.11■□□□□ 0.65
DDX28-201ENST00000332395 TGFB1I1O43294 461 aa19.11■□□□□ 0.65
DDX28-201ENST00000332395 TACC1O75410 805 aa19.11■□□□□ 0.65
DDX28-201ENST00000332395 TBC1D8O95759 1140 aa19.11■□□□□ 0.65
DDX28-201ENST00000332395 EPB41P11171 864 aaKnown RBP19.11■□□□□ 0.65
DDX28-201ENST00000332395 RPS12P25398 132 aaKnown RBP19.11■□□□□ 0.65
DDX28-201ENST00000332395 NMT1P30419 496 aaKnown RBP19.11■□□□□ 0.65
DDX28-201ENST00000332395 MCF2L2Q86YR7 1114 aa19.11■□□□□ 0.65
DDX28-201ENST00000332395 NOA1Q8NC60 698 aaKnown RBP19.11■□□□□ 0.65
DDX28-201ENST00000332395 PNKPQ96T60 521 aa19.11■□□□□ 0.65
DDX28-201ENST00000332395 MLXIPQ9HAP2 919 aa19.11■□□□□ 0.65
DDX28-201ENST00000332395 METTL14Q9HCE5 456 aaKnown RBP19.11■□□□□ 0.65
DDX28-201ENST00000332395 TMEM51Q9NW97 253 aa19.11■□□□□ 0.65
DDX28-201ENST00000332395 KCND2Q9NZV8 630 aa19.11■□□□□ 0.65
DDX28-201ENST00000332395 RAB21Q9UL25 225 aa19.11■□□□□ 0.65
DDX28-201ENST00000332395 ZMYM2Q9UBW7 1377 aa19.11■□□□□ 0.65
DDX28-201ENST00000332395 BRCA1P38398 1863 aaKnown RBP19.11■□□□□ 0.65
DDX28-201ENST00000332395 RBAK-RBAKDNI3L0D1 243 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 CLIC2O15247 247 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 PJA2O43164 708 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 CTNND1O60716 968 aaKnown RBP19.1■□□□□ 0.65
DDX28-201ENST00000332395 RHOXF2BP0C7M4 288 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 BCRP11274 1271 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 CASP4P49662 377 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 RAPGEF1Q13905 1077 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 BANK1Q8NDB2 785 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 IL31RAQ8NI17 732 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 RHOXF2Q9BQY4 288 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 SLC38A10Q9HBR0 1119 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 ST7Q9NRC1 585 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 KCNH7Q9NS40 1196 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 DDX39AO00148 427 aaKnown RBP19.1■□□□□ 0.65
DDX28-201ENST00000332395 ALAS1P13196 640 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 ZNF131P52739 623 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 GHRHRQ02643 423 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 DCAF17Q5H9S7 520 aaPredicted RBP19.1■□□□□ 0.65
DDX28-201ENST00000332395 RAVER2Q9HCJ3 691 aaKnown RBP19.1■□□□□ 0.65
DDX28-201ENST00000332395 GINM1Q9NU53 330 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 SEL1LQ9UBV2 794 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 ODF2LQ9ULJ1 636 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 JRKLQ9Y4A0 524 aa19.1■□□□□ 0.65
DDX28-201ENST00000332395 SASH3O75995 380 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 MOCS3O95396 460 aa19.09■□□□□ 0.65
DDX28-201ENST00000332395 ZC2HC1CQ53FD0 456 aaPredicted RBP19.09■□□□□ 0.65
DDX28-201ENST00000332395 TXLNBQ8N3L3 684 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms