RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 PPP1R12CQ9BZL4 782 aa23.53■■□□□ 1.36
YBX1-202ENST00000332220 WRAP73Q9P2S5 460 aaPredicted RBP23.53■■□□□ 1.36
YBX1-202ENST00000332220 PRKAG2Q9UGJ0 569 aa23.53■■□□□ 1.36
YBX1-202ENST00000332220 HBP1O60381 514 aa23.52■■□□□ 1.36
YBX1-202ENST00000332220 STBD1O95210 358 aa23.52■■□□□ 1.36
YBX1-202ENST00000332220 F13A1P00488 732 aa23.52■■□□□ 1.36
YBX1-202ENST00000332220 OATP04181 439 aa23.52■■□□□ 1.36
YBX1-202ENST00000332220 PRPHP41219 470 aa23.52■■□□□ 1.36
YBX1-202ENST00000332220 FXR2P51116 673 aaKnown RBP eCLIP23.52■■□□□ 1.36
YBX1-202ENST00000332220 CYP4A11Q02928 519 aa23.52■■□□□ 1.36
YBX1-202ENST00000332220 SF3A1Q15459 793 aaKnown RBP23.52■■□□□ 1.36
YBX1-202ENST00000332220 BBXQ8WY36 941 aaPredicted RBP23.52■■□□□ 1.36
YBX1-202ENST00000332220 ZBTB10Q96DT7 871 aa23.52■■□□□ 1.36
YBX1-202ENST00000332220 EIF2AK1Q9BQI3 630 aaKnown RBP23.52■■□□□ 1.36
YBX1-202ENST00000332220 ZDHHC9Q9Y397 364 aa23.52■■□□□ 1.36
YBX1-202ENST00000332220 CLIC4Q9Y696 253 aa23.52■■□□□ 1.36
YBX1-202ENST00000332220 ZBTB42B2RXF5 422 aa23.51■■□□□ 1.35
YBX1-202ENST00000332220 P4HBP07237 508 aaKnown RBP23.51■■□□□ 1.35
YBX1-202ENST00000332220 RAG1P15918 1043 aa23.51■■□□□ 1.35
YBX1-202ENST00000332220 QARSP47897 775 aaKnown RBP23.51■■□□□ 1.35
YBX1-202ENST00000332220 PSMC5P62195 406 aa23.51■■□□□ 1.35
YBX1-202ENST00000332220 CTTNQ14247 550 aaKnown RBP23.51■■□□□ 1.35
YBX1-202ENST00000332220 TMEM266Q2M3C6 531 aa23.51■■□□□ 1.35
YBX1-202ENST00000332220 SERINC5Q86VE9 423 aa23.51■■□□□ 1.35
YBX1-202ENST00000332220 FAM167AQ96KS9 214 aa23.51■■□□□ 1.35
YBX1-202ENST00000332220 LXNQ9BS40 222 aa23.51■■□□□ 1.35
YBX1-202ENST00000332220 HIPK3Q9H422 1215 aa23.51■■□□□ 1.35
YBX1-202ENST00000332220 COL1A2P08123 1366 aa23.51■■□□□ 1.35
YBX1-202ENST00000332220 TMEM150BA6NC51 233 aa23.5■■□□□ 1.35
YBX1-202ENST00000332220 RRN3P2A6NIE6 340 aa23.5■■□□□ 1.35
YBX1-202ENST00000332220 TIMP1P01033 207 aa23.5■■□□□ 1.35
YBX1-202ENST00000332220 GNAT1P11488 350 aa23.5■■□□□ 1.35
YBX1-202ENST00000332220 CYP2C18P33260 490 aa23.5■■□□□ 1.35
YBX1-202ENST00000332220 PTK7Q13308 1070 aa23.5■■□□□ 1.35
YBX1-202ENST00000332220 TRIM71Q2Q1W2 868 aaKnown RBP23.5■■□□□ 1.35
YBX1-202ENST00000332220 USP28Q96RU2 1077 aa23.5■■□□□ 1.35
YBX1-202ENST00000332220 HSD17B14Q9BPX1 270 aa23.5■■□□□ 1.35
YBX1-202ENST00000332220 TUBE1Q9UJT0 475 aa23.5■■□□□ 1.35
YBX1-202ENST00000332220 MBLAC1A4D2B0 266 aaPredicted RBP23.49■■□□□ 1.35
YBX1-202ENST00000332220 SLITRK3O94933 977 aa23.49■■□□□ 1.35
YBX1-202ENST00000332220 BRD1O95696 1058 aa23.49■■□□□ 1.35
YBX1-202ENST00000332220 CEBPZQ03701 1054 aaKnown RBP23.49■■□□□ 1.35
YBX1-202ENST00000332220 PTPAQ15257 358 aa23.49■■□□□ 1.35
YBX1-202ENST00000332220 DTHD1Q6ZMT9 781 aa23.49■■□□□ 1.35
YBX1-202ENST00000332220 RUFY4Q6ZNE9 571 aa23.49■■□□□ 1.35
YBX1-202ENST00000332220 IGSF22Q8N9C0 903 aa23.49■■□□□ 1.35
YBX1-202ENST00000332220 BADQ92934 168 aa23.49■■□□□ 1.35
YBX1-202ENST00000332220 TNPO1Q92973 898 aaKnown RBP23.49■■□□□ 1.35
YBX1-202ENST00000332220 WNT8AQ9H1J5 351 aa23.49■■□□□ 1.35
YBX1-202ENST00000332220 SPATA31C1P0DKV0 1188 aa23.48■■□□□ 1.35
YBX1-202ENST00000332220 MDM2Q00987 491 aaPredicted RBP23.48■■□□□ 1.35
YBX1-202ENST00000332220 XKR3Q5GH77 459 aa23.48■■□□□ 1.35
YBX1-202ENST00000332220 ZNF484Q5JVG2 852 aa23.48■■□□□ 1.35
YBX1-202ENST00000332220 ARL6IP4Q66PJ3 421 aaKnown RBP23.48■■□□□ 1.35
YBX1-202ENST00000332220 TPH2Q8IWU9 490 aa23.48■■□□□ 1.35
YBX1-202ENST00000332220 NEK9Q8TD19 979 aa23.48■■□□□ 1.35
YBX1-202ENST00000332220 NRBP2Q9NSY0 501 aa23.48■■□□□ 1.35
YBX1-202ENST00000332220 LRWD1Q9UFC0 647 aa23.48■■□□□ 1.35
YBX1-202ENST00000332220 SEPT9Q9UHD8 586 aaPredicted RBP23.48■■□□□ 1.35
YBX1-202ENST00000332220 MYH11P35749 1972 aa23.48■■□□□ 1.35
YBX1-202ENST00000332220 DDX11L8A8MPP1 907 aa23.47■■□□□ 1.35
YBX1-202ENST00000332220 PP2D1A8MPX8 630 aa23.47■■□□□ 1.35
YBX1-202ENST00000332220 MED24O75448 989 aa23.47■■□□□ 1.35
YBX1-202ENST00000332220 BMP15O95972 392 aa23.47■■□□□ 1.35
YBX1-202ENST00000332220 ANP32AP39687 249 aaKnown RBP23.47■■□□□ 1.35
YBX1-202ENST00000332220 MAGEA10P43363 369 aaPredicted RBP23.47■■□□□ 1.35
YBX1-202ENST00000332220 CCL23P55773 120 aa23.47■■□□□ 1.35
YBX1-202ENST00000332220 RBL2Q08999 1139 aa23.47■■□□□ 1.35
YBX1-202ENST00000332220 PDIA5Q14554 519 aa23.47■■□□□ 1.35
YBX1-202ENST00000332220 FOXD4L6Q3SYB3 417 aaPredicted RBP23.47■■□□□ 1.35
YBX1-202ENST00000332220 MTHFD1LQ6UB35 978 aa23.47■■□□□ 1.35
YBX1-202ENST00000332220 FOXD4L3Q6VB84 417 aaPredicted RBP23.47■■□□□ 1.35
YBX1-202ENST00000332220 ANO5Q75V66 913 aa23.47■■□□□ 1.35
YBX1-202ENST00000332220 C4orf19Q8IY42 314 aa23.47■■□□□ 1.35
YBX1-202ENST00000332220 SH2D3AQ9BRG2 576 aa23.47■■□□□ 1.35
YBX1-202ENST00000332220 ZSWIM4Q9H7M6 989 aa23.47■■□□□ 1.35
YBX1-202ENST00000332220 CEP131Q9UPN4 1083 aa23.47■■□□□ 1.35
YBX1-202ENST00000332220 VWA3AA6NCI4 1184 aa23.46■■□□□ 1.35
YBX1-202ENST00000332220 RBAK-RBAKDNI3L0D1 243 aa23.46■■□□□ 1.35
YBX1-202ENST00000332220 PITPNM1O00562 1244 aa23.46■■□□□ 1.35
YBX1-202ENST00000332220 ZBTB39O15060 712 aa23.46■■□□□ 1.35
YBX1-202ENST00000332220 DKC1O60832 514 aaKnown RBP eCLIP23.46■■□□□ 1.35
YBX1-202ENST00000332220 KLRC1P26715 233 aa23.46■■□□□ 1.35
YBX1-202ENST00000332220 DDIT3P35638 169 aa23.46■■□□□ 1.35
YBX1-202ENST00000332220 GRIN1Q05586 938 aa23.46■■□□□ 1.35
YBX1-202ENST00000332220 BFSP2Q13515 415 aa23.46■■□□□ 1.35
YBX1-202ENST00000332220 TARBP2Q15633 366 aaKnown RBP23.46■■□□□ 1.35
YBX1-202ENST00000332220 PLA2G4FQ68DD2 849 aa23.46■■□□□ 1.35
YBX1-202ENST00000332220 CATSPER3Q86XQ3 398 aa23.46■■□□□ 1.35
YBX1-202ENST00000332220 CAGE1Q8TC20 777 aa23.46■■□□□ 1.35
YBX1-202ENST00000332220 CEP89Q96ST8 783 aa23.46■■□□□ 1.35
YBX1-202ENST00000332220 NIFKQ9BYG3 293 aaKnown RBP23.46■■□□□ 1.35
YBX1-202ENST00000332220 TFIP11Q9UBB9 837 aaKnown RBP23.46■■□□□ 1.35
YBX1-202ENST00000332220 DAXXQ9UER7 740 aaPredicted RBP23.46■■□□□ 1.35
YBX1-202ENST00000332220 MICAL3Q7RTP6 2002 aa23.45■■□□□ 1.35
YBX1-202ENST00000332220 C22orf31O95567 290 aa23.45■■□□□ 1.34
YBX1-202ENST00000332220 CKBP12277 381 aa23.45■■□□□ 1.34
YBX1-202ENST00000332220 CDC25AP30304 524 aa23.45■■□□□ 1.34
YBX1-202ENST00000332220 MTERF2Q49AM1 385 aa23.45■■□□□ 1.34
YBX1-202ENST00000332220 MFSD5Q6N075 450 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms