RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 FLAD1Q8NFF5 587 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 TSKSQ9UJT2 592 aa15.4■□□□□ 0.06
ATP2C1-201ENST00000328560 CFBP00751 764 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 GH2P01242 217 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 ABCB5Q2M3G0 1257 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 TRMT1LQ7Z2T5 733 aaKnown RBP15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 RUSC1Q9BVN2 902 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 GANQ9H2C0 597 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 GRID2IPA4D2P6 1211 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 ZBTB39O15060 712 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 SPATA31C1P0DKV0 1188 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 PLS1Q14651 629 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 CFAP58Q5T655 872 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 COL23A1Q86Y22 540 aaPredicted RBP15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 AP1M1Q9BXS5 423 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 RASSF4Q9H2L5 321 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 TDRD3Q9H7E2 651 aaKnown RBP15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 TMOD2Q9NZR1 351 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 ZNF831Q5JPB2 1677 aa15.39■□□□□ 0.05
ATP2C1-201ENST00000328560 OPA1O60313 960 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 GNGT1P63211 74 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 ALKBH5Q6P6C2 394 aaKnown RBP15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 MYCT1Q8N699 235 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 SYN2Q92777 582 aaPredicted RBP15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 MSH4O15457 936 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 NR3C1P04150 777 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 SYDE2Q5VT97 1194 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 EMBQ6PCB8 327 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 ETNPPLQ8TBG4 499 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 DCAF4Q8WV16 495 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 SEPT11Q9NVA2 429 aaKnown RBP15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 FAM198AQ9UFP1 575 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 RABGAP1Q9Y3P9 1069 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 RBAK-RBAKDNI3L0D1 243 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 EML1O00423 815 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 CALUO43852 315 aaPredicted RBP15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 ZEB2O60315 1214 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 EPB41P11171 864 aaKnown RBP15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 PON1P27169 355 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 RPA1P27694 616 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 NMT1P30419 496 aaKnown RBP15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 CCT5P48643 541 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 ITIH3Q06033 890 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 ZYXQ15942 572 aaKnown RBP15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 EDRF1Q3B7T1 1238 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 ZC2HC1CQ53FD0 456 aaPredicted RBP15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 SH3BP5LQ7L8J4 393 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 SIAH1Q8IUQ4 282 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 BBXQ8WY36 941 aaPredicted RBP15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 ZIM3Q96PE6 472 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 CAPS2Q9BXY5 557 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 GCNT4Q9P109 453 aa15.38■□□□□ 0.05
ATP2C1-201ENST00000328560 GFPT2O94808 682 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 FAM13AO94988 1023 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 HOXD13P35453 343 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 CCDC174Q6PII3 467 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 SYT2Q8N9I0 419 aaPredicted RBP15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 RDH13Q8NBN7 331 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 U2AF1L4Q8WU68 220 aaKnown RBP15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 AIPL1Q9NZN9 384 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 MYH7BA7E2Y1 1941 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 CDK5RAP2Q96SN8 1893 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 SPIRE1Q08AE8 756 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 PPFIA1Q13136 1202 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 AP3B2Q13367 1082 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 MEI1Q5TIA1 1274 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 MAEAQ7L5Y9 396 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 MAATS1Q7Z4T9 603 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 EIF2AK1Q9BQI3 630 aaKnown RBP15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 NYAP2Q9P242 653 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 BCS1LQ9Y276 419 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 KLRG2A4D1S0 409 aaPredicted RBP15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 PPFIA4O75335 1185 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 IRAK1P51617 712 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 PAK2Q13177 524 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 PPP4R3CPQ6ZMV5 832 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 BCAS4Q8TDM0 211 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 PKD2L1Q9P0L9 805 aa15.37■□□□□ 0.05
ATP2C1-201ENST00000328560 RAD51CO43502 376 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 BMP3P12645 472 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 POLD1P28340 1107 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 GBP6Q6ZN66 633 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 ZNF572Q7Z3I7 529 aaPredicted RBP15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 IRF2BP2Q7Z5L9 587 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 RBM46Q8TBY0 533 aaKnown RBP15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 CASKIN2Q8WXE0 1202 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 AJAP1Q9UKB5 411 aaPredicted RBP15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 PITPNM2Q9BZ72 1349 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 RPL13P26373 211 aaKnown RBP15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 CYP2J2P51589 502 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 JAG1P78504 1218 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 PDCLQ13371 301 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 DDX42Q86XP3 938 aaKnown RBP eCLIP15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 CYP3A7-CYP3A51PA0A087WV96 503 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 GOLGA8KD6RF30 607 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 ABCB4P21439 1286 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 CYP3A7P24462 503 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 TNNC1P63316 161 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 TTMPQ5BVD1 217 aa15.36■□□□□ 0.05
ATP2C1-201ENST00000328560 RBM26Q5T8P6 1007 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms