RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 ZFHX2Q9C0A1 2572 aaPredicted RBP22.51■■□□□ 1.19
SSNA1-201ENST00000322310 IGSF9BQ9UPX0 1349 aa22.51■■□□□ 1.19
SSNA1-201ENST00000322310 ATP8B4Q8TF62 1192 aa22.5■■□□□ 1.19
SSNA1-201ENST00000322310 ATOH1Q92858 354 aaPredicted RBP22.5■■□□□ 1.19
SSNA1-201ENST00000322310 CDHR1Q96JP9 859 aa22.5■■□□□ 1.19
SSNA1-201ENST00000322310 HCSTQ9UBK5 93 aa22.5■■□□□ 1.19
SSNA1-201ENST00000322310 RRN3P2A6NIE6 340 aa22.49■■□□□ 1.19
SSNA1-201ENST00000322310 M0QZ92 97 aa22.49■■□□□ 1.19
SSNA1-201ENST00000322310 PDGFBP01127 241 aaPredicted RBP22.49■■□□□ 1.19
SSNA1-201ENST00000322310 CYP21A2P08686 494 aa22.49■■□□□ 1.19
SSNA1-201ENST00000322310 ATF7P17544 494 aaPredicted RBP22.49■■□□□ 1.19
SSNA1-201ENST00000322310 ERVFC1P60507 584 aa22.49■■□□□ 1.19
SSNA1-201ENST00000322310 MTMR1Q13613 665 aa22.49■■□□□ 1.19
SSNA1-201ENST00000322310 PTPN21Q16825 1174 aa22.49■■□□□ 1.19
SSNA1-201ENST00000322310 SPOUT1Q5T280 376 aaKnown RBP22.49■■□□□ 1.19
SSNA1-201ENST00000322310 CATIPQ7Z7H3 387 aa22.49■■□□□ 1.19
SSNA1-201ENST00000322310 RRP36Q96EU6 259 aaKnown RBP22.49■■□□□ 1.19
SSNA1-201ENST00000322310 CELF4Q9BZC1 486 aaKnown RBP22.49■■□□□ 1.19
SSNA1-201ENST00000322310 TLR9Q9NR96 1032 aa22.49■■□□□ 1.19
SSNA1-201ENST00000322310 TRPC6Q9Y210 931 aa22.49■■□□□ 1.19
SSNA1-201ENST00000322310 H0Y858 1186 aa22.48■■□□□ 1.19
SSNA1-201ENST00000322310 RPLP2P05387 115 aaKnown RBP22.48■■□□□ 1.19
SSNA1-201ENST00000322310 SP100P23497 879 aaPredicted RBP22.48■■□□□ 1.19
SSNA1-201ENST00000322310 NUCB1Q02818 461 aa22.48■■□□□ 1.19
SSNA1-201ENST00000322310 DUSP6Q16828 381 aa22.48■■□□□ 1.19
SSNA1-201ENST00000322310 NEK1Q96PY6 1258 aa22.48■■□□□ 1.19
SSNA1-201ENST00000322310 MYL10Q9BUA6 226 aa22.48■■□□□ 1.19
SSNA1-201ENST00000322310 APOL5Q9BWW9 433 aa22.48■■□□□ 1.19
SSNA1-201ENST00000322310 SPZ1Q9BXG8 430 aa22.48■■□□□ 1.19
SSNA1-201ENST00000322310 PCDHB12Q9Y5F1 795 aa22.48■■□□□ 1.19
SSNA1-201ENST00000322310 UBIAD1Q9Y5Z9 338 aa22.48■■□□□ 1.19
SSNA1-201ENST00000322310 MGEA5O60502 916 aa22.47■■□□□ 1.19
SSNA1-201ENST00000322310 FGF18O76093 207 aa22.47■■□□□ 1.19
SSNA1-201ENST00000322310 SARSP49591 514 aaKnown RBP22.47■■□□□ 1.19
SSNA1-201ENST00000322310 UBE3AQ05086 875 aa22.47■■□□□ 1.19
SSNA1-201ENST00000322310 NFX1Q12986 1120 aaKnown RBP22.47■■□□□ 1.19
SSNA1-201ENST00000322310 UBE2SQ16763 222 aa22.47■■□□□ 1.19
SSNA1-201ENST00000322310 RALYLQ86SE5 291 aaKnown RBP22.47■■□□□ 1.19
SSNA1-201ENST00000322310 PCDHB7Q9Y5E2 793 aa22.47■■□□□ 1.19
SSNA1-201ENST00000322310 PCDHA2Q9Y5H9 948 aa22.47■■□□□ 1.19
SSNA1-201ENST00000322310 CACNA1HO95180 2353 aa22.47■■□□□ 1.19
SSNA1-201ENST00000322310 TBKBP1A7MCY6 615 aa22.46■■□□□ 1.19
SSNA1-201ENST00000322310 ANTXR2P58335 489 aa22.46■■□□□ 1.19
SSNA1-201ENST00000322310 SART3Q15020 963 aaKnown RBP22.46■■□□□ 1.19
SSNA1-201ENST00000322310 PLCB4Q15147 1175 aa22.46■■□□□ 1.19
SSNA1-201ENST00000322310 FAM102BQ5T8I3 360 aa22.46■■□□□ 1.19
SSNA1-201ENST00000322310 S1PR5Q9H228 398 aa22.46■■□□□ 1.19
SSNA1-201ENST00000322310 JPH1Q9HDC5 661 aaPredicted RBP22.46■■□□□ 1.19
SSNA1-201ENST00000322310 TMEM260Q9NX78 707 aa22.46■■□□□ 1.19
SSNA1-201ENST00000322310 SEC63Q9UGP8 760 aaKnown RBP22.46■■□□□ 1.19
SSNA1-201ENST00000322310 U3KPZ7 1027 aaPredicted RBP22.46■■□□□ 1.19
SSNA1-201ENST00000322310 LOXHD1Q8IVV2 1947 aa22.46■■□□□ 1.19
SSNA1-201ENST00000322310 E7EWF7 191 aa22.45■■□□□ 1.18
SSNA1-201ENST00000322310 KRT76Q01546 638 aa22.45■■□□□ 1.18
SSNA1-201ENST00000322310 PTH1RQ03431 593 aa22.45■■□□□ 1.18
SSNA1-201ENST00000322310 APOBRQ0VD83 1088 aa22.45■■□□□ 1.18
SSNA1-201ENST00000322310 ZBTB33Q86T24 672 aa22.45■■□□□ 1.18
SSNA1-201ENST00000322310 THNSL1Q8IYQ7 743 aa22.45■■□□□ 1.18
SSNA1-201ENST00000322310 AZI2Q9H6S1 392 aa22.45■■□□□ 1.18
SSNA1-201ENST00000322310 PSTPIP2Q9H939 334 aa22.45■■□□□ 1.18
SSNA1-201ENST00000322310 JADE2Q9NQC1 790 aa22.45■■□□□ 1.18
SSNA1-201ENST00000322310 AAASQ9NRG9 546 aa22.45■■□□□ 1.18
SSNA1-201ENST00000322310 GINS2Q9Y248 185 aa22.45■■□□□ 1.18
SSNA1-201ENST00000322310 FSCN2O14926 492 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 PLEKHA8P1O95397 391 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 IGHDP01880 384 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 TECP42680 631 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 KCNC3Q14003 757 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 PLPP4Q5VZY2 271 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 LLGL2Q6P1M3 1020 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 ZNF654Q8IZM8 581 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 CMTR1Q8N1G2 835 aaKnown RBP22.44■■□□□ 1.18
SSNA1-201ENST00000322310 COLGALT1Q8NBJ5 622 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 NCOA7Q8NI08 942 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 CTCFLQ8NI51 663 aaPredicted RBP22.44■■□□□ 1.18
SSNA1-201ENST00000322310 IGDCC4Q8TDY8 1250 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 CDCA3Q99618 268 aaPredicted RBP22.44■■□□□ 1.18
SSNA1-201ENST00000322310 IRF2BPLQ9H1B7 796 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 RWDD1Q9H446 243 aaPredicted RBP22.44■■□□□ 1.18
SSNA1-201ENST00000322310 CDHR5Q9HBB8 845 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 ERVK-5Q9HDB9 667 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 TYW1Q9NV66 732 aaKnown RBP22.44■■□□□ 1.18
SSNA1-201ENST00000322310 SLC9A2Q9UBY0 812 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 CDH22Q9UJ99 828 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 NOC2LQ9Y3T9 749 aaKnown RBP22.44■■□□□ 1.18
SSNA1-201ENST00000322310 KDM3AQ9Y4C1 1321 aa22.44■■□□□ 1.18
SSNA1-201ENST00000322310 PLXNA3P51805 1871 aa22.43■■□□□ 1.18
SSNA1-201ENST00000322310 SMIM35A0A1B0GVV1 85 aa22.43■■□□□ 1.18
SSNA1-201ENST00000322310 ANKRD54Q6NXT1 300 aa22.43■■□□□ 1.18
SSNA1-201ENST00000322310 SYCE2Q6PIF2 218 aa22.43■■□□□ 1.18
SSNA1-201ENST00000322310 TMEM40Q8WWA1 233 aa22.43■■□□□ 1.18
SSNA1-201ENST00000322310 RIPOR3Q96MK2 946 aa22.43■■□□□ 1.18
SSNA1-201ENST00000322310 ADAM2Q99965 735 aa22.43■■□□□ 1.18
SSNA1-201ENST00000322310 hCG_1642624A0A1W2PR95 340 aa22.42■■□□□ 1.18
SSNA1-201ENST00000322310 FSD2A1L4K1 749 aa22.42■■□□□ 1.18
SSNA1-201ENST00000322310 DENND3A2RUS2 1198 aa22.42■■□□□ 1.18
SSNA1-201ENST00000322310 ACTR2P61160 394 aa22.42■■□□□ 1.18
SSNA1-201ENST00000322310 MTHFD1LQ6UB35 978 aa22.42■■□□□ 1.18
SSNA1-201ENST00000322310 TMEM184AQ6ZMB5 413 aa22.42■■□□□ 1.18
SSNA1-201ENST00000322310 ASCL5Q7RTU5 278 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms