RNA–Protein interactions for RNA: ENST00000320370.11

SSFA2-201, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSFA2, Length 4,965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-201ENST00000320370 CALR3Q96L12 384 aaKnown RBP17.98■□□□□ 0.47
SSFA2-201ENST00000320370 CEP170P1Q96L14 293 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 E9PMD0 336 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 RAD17O75943 681 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 RNASELQ05823 741 aaKnown RBP17.98■□□□□ 0.47
SSFA2-201ENST00000320370 PDCLQ13371 301 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 NFRKBQ6P4R8 1299 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 CCT6BQ92526 530 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 CPSF2Q9P2I0 782 aaKnown RBP17.98■□□□□ 0.47
SSFA2-201ENST00000320370 PCDHA6Q9UN73 950 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 PCDHA8Q9Y5H6 950 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 SGK1O00141 431 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 RWDD2BP57060 319 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 MAP3K21Q5TCX8 1036 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 TC2NQ8N9U0 490 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 CFAP57Q96MR6 1250 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 ATP1A1P05023 1023 aaKnown RBP17.98■□□□□ 0.47
SSFA2-201ENST00000320370 TPD52P55327 224 aaPredicted RBP17.98■□□□□ 0.47
SSFA2-201ENST00000320370 NYAP1Q6ZVC0 841 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 NEDD1Q8NHV4 660 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 COG1Q8WTW3 980 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 CDHR1Q96JP9 859 aa17.98■□□□□ 0.47
SSFA2-201ENST00000320370 MYCBPQ99417 103 aaPredicted RBP17.98■□□□□ 0.47
SSFA2-201ENST00000320370 CRCPO75575 148 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 TMOD1P28289 359 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 HOXA13P31271 388 aaPredicted RBP17.97■□□□□ 0.47
SSFA2-201ENST00000320370 IRX4P78413 519 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 ADSSL1Q8N142 457 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 RUBCNQ92622 972 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 DCPSQ96C86 337 aaKnown RBP17.97■□□□□ 0.47
SSFA2-201ENST00000320370 SLC5A4Q9NY91 659 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 SYNGAP1Q96PV0 1343 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 SLCO1A2P46721 670 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 RINT1Q6NUQ1 792 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 ARHGEF1Q92888 912 aaKnown RBP17.97■□□□□ 0.47
SSFA2-201ENST00000320370 TMEM260Q9NX78 707 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 INHBAP08476 426 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 YWHAGP61981 247 aaKnown RBP eCLIP17.97■□□□□ 0.47
SSFA2-201ENST00000320370 CYP4F22Q6NT55 531 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 RBM43Q6ZSC3 357 aaKnown RBP17.97■□□□□ 0.47
SSFA2-201ENST00000320370 TRIM50Q86XT4 487 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 RTKN2Q8IZC4 609 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 NACA2Q9H009 215 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 ZKSCAN8Q15776 578 aaPredicted RBP17.97■□□□□ 0.47
SSFA2-201ENST00000320370 KNOP1Q1ED39 458 aaKnown RBP17.97■□□□□ 0.47
SSFA2-201ENST00000320370 NAALADL2Q58DX5 795 aa17.97■□□□□ 0.47
SSFA2-201ENST00000320370 IGBP1P78318 339 aa17.96■□□□□ 0.47
SSFA2-201ENST00000320370 RNF169Q8NCN4 708 aa17.96■□□□□ 0.47
SSFA2-201ENST00000320370 TCP11Q8WWU5 503 aa17.96■□□□□ 0.47
SSFA2-201ENST00000320370 KLHL29Q96CT2 875 aa17.96■□□□□ 0.47
SSFA2-201ENST00000320370 IRX2Q9BZI1 471 aaPredicted RBP17.96■□□□□ 0.47
SSFA2-201ENST00000320370 H7C0C1 242 aa17.96■□□□□ 0.47
SSFA2-201ENST00000320370 LUC7L3O95232 432 aaKnown RBP17.96■□□□□ 0.47
SSFA2-201ENST00000320370 ATP5OP48047 213 aa17.96■□□□□ 0.47
SSFA2-201ENST00000320370 VSNL1P62760 191 aa17.96■□□□□ 0.47
SSFA2-201ENST00000320370 TRIM9Q9C026 710 aa17.96■□□□□ 0.47
SSFA2-201ENST00000320370 FAM205CA6NFA0 338 aa17.96■□□□□ 0.47
SSFA2-201ENST00000320370 ARHGAP27Q6ZUM4 889 aa17.96■□□□□ 0.47
SSFA2-201ENST00000320370 GSPT2Q8IYD1 628 aaKnown RBP17.96■□□□□ 0.47
SSFA2-201ENST00000320370 TAB3Q8N5C8 712 aaPredicted RBP17.96■□□□□ 0.47
SSFA2-201ENST00000320370 FUCA2Q9BTY2 467 aa17.96■□□□□ 0.47
SSFA2-201ENST00000320370 HPS5Q9UPZ3 1129 aa17.96■□□□□ 0.47
SSFA2-201ENST00000320370 SLC12A2P55011 1212 aa17.96■□□□□ 0.46
SSFA2-201ENST00000320370 FAM47CQ5HY64 1035 aa17.96■□□□□ 0.46
SSFA2-201ENST00000320370 C12orf60Q5U649 245 aa17.96■□□□□ 0.46
SSFA2-201ENST00000320370 ANKRD40Q6AI12 368 aa17.96■□□□□ 0.46
SSFA2-201ENST00000320370 TTBK2Q6IQ55 1244 aa17.96■□□□□ 0.46
SSFA2-201ENST00000320370 PDXDC1Q6P996 788 aa17.96■□□□□ 0.46
SSFA2-201ENST00000320370 TADA2BQ86TJ2 420 aa17.96■□□□□ 0.46
SSFA2-201ENST00000320370 HACE1Q8IYU2 909 aa17.96■□□□□ 0.46
SSFA2-201ENST00000320370 NSUN4Q96CB9 384 aaKnown RBP17.96■□□□□ 0.46
SSFA2-201ENST00000320370 KRT1P04264 644 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 AFF2P51816 1311 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 POTEB3A0JP26 581 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 POTECB2RU33 542 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 FCER1AP12319 257 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 ARHGAP4P98171 946 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 TFDP1Q14186 410 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 TMED2Q15363 201 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 POTEBQ6S5H4 581 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 PDZD4Q76G19 769 aaPredicted RBP17.95■□□□□ 0.46
SSFA2-201ENST00000320370 PODNQ7Z5L7 613 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 RFX6Q8HWS3 928 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 EFCC1Q9HA90 598 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 CD2APQ9Y5K6 639 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 USP17L15C9J2P7 530 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 USP17L13C9JLJ4 530 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 USP17L11C9JVI0 530 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 USP17L18D6R9N7 530 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 USP17L22D6RA61 530 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 USP17L17D6RBQ6 530 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 USP17L19D6RCP7 530 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 USP17L20D6RJB6 530 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 USP17L24Q0WX57 530 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 DNAJC24Q6P3W2 148 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 USP17L6PQ6QN14 398 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 STAG2Q8N3U4 1231 aa17.95■□□□□ 0.46
SSFA2-201ENST00000320370 ARHGAP42A6NI28 874 aa17.94■□□□□ 0.46
SSFA2-201ENST00000320370 SFI1A8K8P3 1242 aa17.94■□□□□ 0.46
SSFA2-201ENST00000320370 SRGNP10124 158 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms