RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 NHEJ1Q9H9Q4 299 aaPredicted RBP14.96□□□□□ -0.01
EDEM3-201ENST00000318130 HEG1Q9ULI3 1381 aa14.96□□□□□ -0.01
EDEM3-201ENST00000318130 KBTBD13C9JR72 458 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 ATP1A3P13637 1013 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 HUNKP57058 714 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 COA1Q9GZY4 146 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 ANAPC5Q9UJX4 755 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 MYOM2P54296 1465 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 EIF3CLB5ME19 914 aaKnown RBP14.96□□□□□ -0.02
EDEM3-201ENST00000318130 C2CD2LO14523 706 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 WDR46O15213 610 aaKnown RBP14.96□□□□□ -0.02
EDEM3-201ENST00000318130 PPFIA2O75334 1257 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 LMNB1P20700 586 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 PDCLQ13371 301 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 DCAF4L1Q3SXM0 396 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 ZNF449Q6P9G9 518 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.96□□□□□ -0.02
EDEM3-201ENST00000318130 RBM46Q8TBY0 533 aaKnown RBP14.96□□□□□ -0.02
EDEM3-201ENST00000318130 P2RX5Q93086 422 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 SPATA33Q96N06 139 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 EIF3CQ99613 913 aaKnown RBP14.96□□□□□ -0.02
EDEM3-201ENST00000318130 INTUQ9ULD6 942 aa14.96□□□□□ -0.02
EDEM3-201ENST00000318130 PSAPP07602 524 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 YAF2Q8IY57 180 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 OR6J1Q8NGC5 347 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 TRIM56Q9BRZ2 755 aaKnown RBP14.95□□□□□ -0.02
EDEM3-201ENST00000318130 SLC7A5P2Q9GIP4 190 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 SPATA31A3Q5VYP0 1347 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 NDUFA10O95299 355 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 LARGE1O95461 756 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 NSFP46459 744 aaKnown RBP14.95□□□□□ -0.02
EDEM3-201ENST00000318130 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.95□□□□□ -0.02
EDEM3-201ENST00000318130 ANKRD20A4Q4UJ75 823 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 ANKRD20A8PQ5CZ79 823 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 ANKRD20A2Q5SQ80 823 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 ANKRD20A1Q5TYW2 823 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 SDCCAG3Q96C92 435 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 HAUS1Q96CS2 278 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 CYP21A2P08686 494 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 PTPREP23469 700 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 CYP27A1Q02318 531 aa14.95□□□□□ -0.02
EDEM3-201ENST00000318130 SPDYE1Q8NFV5 336 aaPredicted RBP14.95□□□□□ -0.02
EDEM3-201ENST00000318130 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
EDEM3-201ENST00000318130 EIF4A3P38919 411 aaKnown RBP14.95□□□□□ -0.02
EDEM3-201ENST00000318130 KIF23Q02241 960 aaPredicted RBP14.95□□□□□ -0.02
EDEM3-201ENST00000318130 DBNLQ9UJU6 430 aaKnown RBP14.95□□□□□ -0.02
EDEM3-201ENST00000318130 SGK1O00141 431 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 ECEL1O95672 775 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 ZBTB17Q13105 803 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 PPWD1Q96BP3 646 aaKnown RBP14.94□□□□□ -0.02
EDEM3-201ENST00000318130 DHTKD1Q96HY7 919 aaPredicted RBP14.94□□□□□ -0.02
EDEM3-201ENST00000318130 PRR36Q9H6K5 1346 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 ANLNQ9NQW6 1124 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 NFU1Q9UMS0 254 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 GPC4O75487 556 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 ENOX1Q8TC92 643 aaKnown RBP14.94□□□□□ -0.02
EDEM3-201ENST00000318130 SLC24A3Q9HC58 644 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 COL4A3BPQ9Y5P4 624 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 APOEP02649 317 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 PDE1BQ01064 536 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 RASGRF1Q13972 1273 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 APOBEC3FQ8IUX4 373 aaKnown RBP14.94□□□□□ -0.02
EDEM3-201ENST00000318130 FAM133AQ8N9E0 248 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 URGCPQ8TCY9 931 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 RPF1Q9H9Y2 349 aaKnown RBP14.94□□□□□ -0.02
EDEM3-201ENST00000318130 SGO2Q562F6 1265 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 ZNF658Q5TYW1 1059 aaPredicted RBP14.94□□□□□ -0.02
EDEM3-201ENST00000318130 CC2D1AQ6P1N0 951 aaPredicted RBP14.94□□□□□ -0.02
EDEM3-201ENST00000318130 FASTKD5Q7L8L6 764 aaKnown RBP14.94□□□□□ -0.02
EDEM3-201ENST00000318130 MAP3K4Q9Y6R4 1608 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 RASGRF2O14827 1237 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 TTC4O95801 387 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 TRAPPC10P48553 1259 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 IL1RL1Q01638 556 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 NEK9Q8TD19 979 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 PANX2Q96RD6 677 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 TSC22D3Q99576 134 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.94□□□□□ -0.02
EDEM3-201ENST00000318130 FOXP1Q9H334 677 aaPredicted RBP14.94□□□□□ -0.02
EDEM3-201ENST00000318130 KANSL2Q9H9L4 492 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 GGA3Q9NZ52 723 aa14.94□□□□□ -0.02
EDEM3-201ENST00000318130 IQCA1LA6NCM1 817 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 CCDC85CA6NKD9 419 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 ECE1P42892 770 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 PEX3P56589 373 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 RAPH1Q70E73 1250 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 DDX53Q86TM3 631 aaKnown RBP14.93□□□□□ -0.02
EDEM3-201ENST00000318130 PIP4K2CQ8TBX8 421 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 RNF139Q8WU17 664 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 EXT2Q93063 718 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 RNF14Q9UBS8 474 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 MYO1FO00160 1098 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 NEMP1O14524 444 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 FCER1AP12319 257 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 GARSP41250 739 aaKnown RBP14.93□□□□□ -0.02
EDEM3-201ENST00000318130 YIPF2Q9BWQ6 316 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 AP1M1Q9BXS5 423 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 NOP53Q9NZM5 478 aaKnown RBP14.93□□□□□ -0.02
EDEM3-201ENST00000318130 MINPP1Q9UNW1 487 aa14.93□□□□□ -0.02
EDEM3-201ENST00000318130 HMGB1P1B2RPK0 211 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms