RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 TRIM32Q13049 653 aa18■□□□□ 0.47
TUBB3-201ENST00000315491 DHX8Q14562 1220 aaKnown RBP18■□□□□ 0.47
TUBB3-201ENST00000315491 PDZRN4Q6ZMN7 1036 aaPredicted RBP18■□□□□ 0.47
TUBB3-201ENST00000315491 ZSCAN30Q86W11 494 aa18■□□□□ 0.47
TUBB3-201ENST00000315491 PXYLP1Q8TE99 480 aa18■□□□□ 0.47
TUBB3-201ENST00000315491 PIGOQ8TEQ8 1089 aa18■□□□□ 0.47
TUBB3-201ENST00000315491 KIAA1468Q9P260 1216 aa18■□□□□ 0.47
TUBB3-201ENST00000315491 GNEQ9Y223 722 aaKnown RBP18■□□□□ 0.47
TUBB3-201ENST00000315491 IGSF9BQ9UPX0 1349 aa18■□□□□ 0.47
TUBB3-201ENST00000315491 HMGCRP04035 888 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 SSBP05455 408 aaKnown RBP eCLIP17.99■□□□□ 0.47
TUBB3-201ENST00000315491 AMPD3Q01432 767 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 CACNB2Q08289 660 aaPredicted RBP17.99■□□□□ 0.47
TUBB3-201ENST00000315491 GAS2L3Q86XJ1 694 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 PPTC7Q8NI37 304 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 PCYT2Q99447 389 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 LRRC27Q9C0I9 530 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 MAFBQ9Y5Q3 323 aaPredicted RBP17.99■□□□□ 0.47
TUBB3-201ENST00000315491 MYL1P05976 194 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 CASP1P29466 404 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 SLC12A3P55017 1021 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 DPYDQ12882 1025 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 FAM160B1Q5W0V3 765 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 SYT2Q8N9I0 419 aaPredicted RBP17.99■□□□□ 0.47
TUBB3-201ENST00000315491 AFAP1L1Q8TED9 768 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 AFG1LQ8WV93 481 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 BLZF1Q9H2G9 400 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 BHMT2Q9H2M3 363 aa17.99■□□□□ 0.47
TUBB3-201ENST00000315491 ZBTB39O15060 712 aa17.98■□□□□ 0.47
TUBB3-201ENST00000315491 DYNC1LI2O43237 492 aaPredicted RBP17.98■□□□□ 0.47
TUBB3-201ENST00000315491 ZNF862O60290 1169 aa17.98■□□□□ 0.47
TUBB3-201ENST00000315491 LGR5O75473 907 aa17.98■□□□□ 0.47
TUBB3-201ENST00000315491 YWHABP31946 246 aaKnown RBP17.98■□□□□ 0.47
TUBB3-201ENST00000315491 STAT5BP51692 787 aa17.98■□□□□ 0.47
TUBB3-201ENST00000315491 CUL4BQ13620 913 aa17.98■□□□□ 0.47
TUBB3-201ENST00000315491 HS1BP3Q53T59 392 aa17.98■□□□□ 0.47
TUBB3-201ENST00000315491 UTP14CQ5TAP6 766 aaKnown RBP17.98■□□□□ 0.47
TUBB3-201ENST00000315491 TLK2Q86UE8 772 aa17.98■□□□□ 0.47
TUBB3-201ENST00000315491 SLAIN1Q8ND83 568 aa17.98■□□□□ 0.47
TUBB3-201ENST00000315491 C7orf25Q9BPX7 421 aa17.98■□□□□ 0.47
TUBB3-201ENST00000315491 AZI2Q9H6S1 392 aa17.98■□□□□ 0.47
TUBB3-201ENST00000315491 DBR1Q9UK59 544 aaKnown RBP17.98■□□□□ 0.47
TUBB3-201ENST00000315491 Q9Y3F1 56 aa17.98■□□□□ 0.47
TUBB3-201ENST00000315491 PCDHA5Q9Y5H7 936 aa17.98■□□□□ 0.47
TUBB3-201ENST00000315491 MYMKA6NI61 221 aa17.97■□□□□ 0.47
TUBB3-201ENST00000315491 SMC2O95347 1197 aa17.97■□□□□ 0.47
TUBB3-201ENST00000315491 PRKAR2AP13861 404 aaKnown RBP17.97■□□□□ 0.47
TUBB3-201ENST00000315491 ZNF445P59923 1031 aa17.97■□□□□ 0.47
TUBB3-201ENST00000315491 SMARCE1Q969G3 411 aa17.97■□□□□ 0.47
TUBB3-201ENST00000315491 LENG1Q96BZ8 264 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-201ENST00000315491 TRIM9Q9C026 710 aa17.97■□□□□ 0.47
TUBB3-201ENST00000315491 TUBE1Q9UJT0 475 aa17.97■□□□□ 0.47
TUBB3-201ENST00000315491 EMSYQ7Z589 1322 aa17.97■□□□□ 0.47
TUBB3-201ENST00000315491 STBD1O95210 358 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 CYP11B2P19099 503 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 PRKCEQ02156 737 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 SASS6Q6UVJ0 657 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 GPBP1Q86WP2 473 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 ANKEF1Q9NU02 776 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 PTCH2Q9Y6C5 1203 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 ARHGEF35A5YM69 484 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 SEPT4O43236 478 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 MMP3P08254 477 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 ATP4AP20648 1035 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 CNGA1P29973 690 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 SARSP49591 514 aaKnown RBP17.96■□□□□ 0.47
TUBB3-201ENST00000315491 XKR3Q5GH77 459 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 MAP3K21Q5TCX8 1036 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 NT5DC1Q5TFE4 455 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 OTUD6AQ7L8S5 288 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 PLPPR4Q7Z2D5 763 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 SPATA20Q8TB22 786 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 GLG1Q92896 1179 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 AP5M1Q9H0R1 490 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 SMARCAD1Q9H4L7 1026 aa17.96■□□□□ 0.47
TUBB3-201ENST00000315491 BMP2KQ9NSY1 1161 aaPredicted RBP17.96■□□□□ 0.47
TUBB3-201ENST00000315491 DUSP11O75319 330 aaKnown RBP17.95■□□□□ 0.46
TUBB3-201ENST00000315491 PPFIA4O75335 1185 aa17.95■□□□□ 0.46
TUBB3-201ENST00000315491 OATP04181 439 aa17.95■□□□□ 0.46
TUBB3-201ENST00000315491 HOXD8P13378 290 aaPredicted RBP17.95■□□□□ 0.46
TUBB3-201ENST00000315491 CCND3P30281 292 aaPredicted RBP17.95■□□□□ 0.46
TUBB3-201ENST00000315491 GRK4P32298 578 aa17.95■□□□□ 0.46
TUBB3-201ENST00000315491 RARRES1P49788 294 aa17.95■□□□□ 0.46
TUBB3-201ENST00000315491 ASIC1P78348 528 aa17.95■□□□□ 0.46
TUBB3-201ENST00000315491 CNNM4Q6P4Q7 775 aa17.95■□□□□ 0.46
TUBB3-201ENST00000315491 ANO5Q75V66 913 aa17.95■□□□□ 0.46
TUBB3-201ENST00000315491 TRMT1LQ7Z2T5 733 aaKnown RBP17.95■□□□□ 0.46
TUBB3-201ENST00000315491 TRIM50Q86XT4 487 aa17.95■□□□□ 0.46
TUBB3-201ENST00000315491 DDX12PQ92771 950 aa17.95■□□□□ 0.46
TUBB3-201ENST00000315491 CCDC43Q96MW1 224 aaKnown RBP17.95■□□□□ 0.46
TUBB3-201ENST00000315491 SEPT9Q9UHD8 586 aaPredicted RBP17.95■□□□□ 0.46
TUBB3-201ENST00000315491 TMEM150BA6NC51 233 aa17.94■□□□□ 0.46
TUBB3-201ENST00000315491 A6NJR5 290 aa17.94■□□□□ 0.46
TUBB3-201ENST00000315491 RPN1P04843 607 aaKnown RBP17.94■□□□□ 0.46
TUBB3-201ENST00000315491 INHAP05111 366 aa17.94■□□□□ 0.46
TUBB3-201ENST00000315491 LGALS2P05162 132 aa17.94■□□□□ 0.46
TUBB3-201ENST00000315491 DGKDQ16760 1214 aa17.94■□□□□ 0.46
TUBB3-201ENST00000315491 ARSHQ5FYA8 562 aa17.94■□□□□ 0.46
TUBB3-201ENST00000315491 PLA2G4FQ68DD2 849 aa17.94■□□□□ 0.46
TUBB3-201ENST00000315491 RINT1Q6NUQ1 792 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms