RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 FYB2Q5VWT5 728 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 C17orf53Q8N3J3 647 aaPredicted RBP14.61□□□□□ -0.07
RFFL-201ENST00000315249 ARFGAP2Q8N6H7 521 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 DYNC1I1O14576 645 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 RPS12P25398 132 aaKnown RBP14.61□□□□□ -0.07
RFFL-201ENST00000315249 ERCC6LQ2NKX8 1250 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 INTS8Q75QN2 995 aaKnown RBP14.61□□□□□ -0.07
RFFL-201ENST00000315249 GPRC5AQ8NFJ5 357 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 MAN1B1Q9UKM7 699 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 CALRP27797 417 aaKnown RBP14.61□□□□□ -0.07
RFFL-201ENST00000315249 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 GRM4Q14833 912 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 MGARPQ8TDB4 240 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 GRK7Q8WTQ7 553 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 ZKSCAN4Q969J2 545 aaPredicted RBP14.61□□□□□ -0.07
RFFL-201ENST00000315249 NUDT12Q9BQG2 462 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 RSPH14Q9UHP6 348 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 LARGE1O95461 756 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 KRT222Q8N1A0 295 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 GIMAP7Q8NHV1 300 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 POLR3FQ9H1D9 316 aaPredicted RBP14.61□□□□□ -0.07
RFFL-201ENST00000315249 IFT122Q9HBG6 1241 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 JPH1Q9HDC5 661 aaPredicted RBP14.61□□□□□ -0.07
RFFL-201ENST00000315249 SLC9A2Q9UBY0 812 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 NTSR2O95665 410 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 CPB1P15086 417 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 PSMD2Q13200 908 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 C12orf60Q5U649 245 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 KSR1Q8IVT5 923 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 FAM133AQ8N9E0 248 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 CCDC51Q96ER9 411 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 FAM81BQ96LP2 452 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 BCORL1Q5H9F3 1711 aa14.61□□□□□ -0.07
RFFL-201ENST00000315249 POTEB3A0JP26 581 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 POTEFA5A3E0 1075 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 POTECB2RU33 542 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 POTEIP0CG38 1075 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 GYS1P13807 737 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 SFNP31947 248 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 GPC3P51654 580 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 POTEBQ6S5H4 581 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 POTEGQ6S5H5 508 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 POTEEQ6S8J3 1075 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 DNAAF3Q8N9W5 541 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 LPAR1Q92633 364 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.6□□□□□ -0.07
RFFL-201ENST00000315249 SAR1BQ9Y6B6 198 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 ALCAMQ13740 583 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 ZNF699Q32M78 642 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 FAM76AQ8TAV0 307 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 ADARB2Q9NS39 739 aaKnown RBP14.6□□□□□ -0.07
RFFL-201ENST00000315249 I3L4J1 428 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 MAN2A1Q16706 1144 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 LXNQ9BS40 222 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 SMYD2Q9NRG4 433 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 PIN4Q9Y237 131 aaKnown RBP14.6□□□□□ -0.07
RFFL-201ENST00000315249 CAPN2P17655 700 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 GUCY2FP51841 1108 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 GOLGA8FQ08AF8 430 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 GOLGA8DPQ0D2H9 430 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 ACTN1P12814 892 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 BZW2Q9Y6E2 419 aaKnown RBP14.6□□□□□ -0.07
RFFL-201ENST00000315249 DIP2BQ9P265 1576 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 PRPSAP2O60256 369 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 PHBP35232 272 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 FCGRTP55899 365 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 CYP27A1Q02318 531 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 SNX1Q13596 522 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 INTS5Q6P9B9 1019 aaKnown RBP14.6□□□□□ -0.07
RFFL-201ENST00000315249 SDCCAG8Q86SQ7 713 aaPredicted RBP14.6□□□□□ -0.07
RFFL-201ENST00000315249 PPP4R1Q8TF05 950 aa14.6□□□□□ -0.07
RFFL-201ENST00000315249 BUB1BO60566 1050 aaPredicted RBP14.59□□□□□ -0.07
RFFL-201ENST00000315249 TGFB2P61812 414 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 CCDC121Q6ZUS5 278 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 RAPH1Q70E73 1250 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 FAM151AQ8WW52 585 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 DDX41Q9UJV9 622 aaKnown RBP14.59□□□□□ -0.07
RFFL-201ENST00000315249 WDR46O15213 610 aaKnown RBP14.59□□□□□ -0.07
RFFL-201ENST00000315249 SLFN14P0C7P3 912 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 SRGAP2BP0DMP2 458 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 NT5C2P49902 561 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 ARL13BQ3SXY8 428 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 TACC3Q9Y6A5 838 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 P4HBP07237 508 aaKnown RBP14.59□□□□□ -0.07
RFFL-201ENST00000315249 TUBBP07437 444 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 KCNV1Q6PIU1 500 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 ATG9AQ7Z3C6 839 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 LINC00301Q8NCQ3 95 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 HSPH1Q92598 858 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 FAM20AQ96MK3 541 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 DPH5Q9H2P9 285 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 NDUFB10O96000 172 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 KRT10P13645 584 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 EHHADHQ08426 723 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 GNASQ5JWF2 1037 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 MRPL4Q9BYD3 311 aaKnown RBP14.59□□□□□ -0.07
RFFL-201ENST00000315249 C2orf40Q9H1Z8 148 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 BARHL2Q9NY43 387 aa14.59□□□□□ -0.07
RFFL-201ENST00000315249 PPFIA1Q13136 1202 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms