RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 DKC1O60832 514 aaKnown RBP eCLIP18.51■□□□□ 0.55
CLCF1-201ENST00000312438 PRKCSHP14314 528 aaPredicted RBP18.51■□□□□ 0.55
CLCF1-201ENST00000312438 YWHABP31946 246 aaKnown RBP18.51■□□□□ 0.55
CLCF1-201ENST00000312438 MTIF2P46199 727 aaKnown RBP18.51■□□□□ 0.55
CLCF1-201ENST00000312438 ZNF131P52739 623 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 KNOP1Q1ED39 458 aaKnown RBP18.51■□□□□ 0.55
CLCF1-201ENST00000312438 PADI6Q6TGC4 694 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 NELFCDQ8IXH7 590 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 C17orf53Q8N3J3 647 aaPredicted RBP18.51■□□□□ 0.55
CLCF1-201ENST00000312438 ZNF507Q8TCN5 953 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 MS4A4AQ96JQ5 239 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 CEP63Q96MT8 703 aa18.51■□□□□ 0.55
CLCF1-201ENST00000312438 JPH1Q9HDC5 661 aaPredicted RBP18.51■□□□□ 0.55
CLCF1-201ENST00000312438 RBBP6Q7Z6E9 1792 aaKnown RBP18.5■□□□□ 0.55
CLCF1-201ENST00000312438 ASTN1O14525 1302 aa18.5■□□□□ 0.55
CLCF1-201ENST00000312438 A0A1W2PQC6 194 aa18.5■□□□□ 0.55
CLCF1-201ENST00000312438 SFI1A8K8P3 1242 aa18.5■□□□□ 0.55
CLCF1-201ENST00000312438 AKR1B15C9JRZ8 316 aaPredicted RBP18.5■□□□□ 0.55
CLCF1-201ENST00000312438 EDNRBP24530 442 aa18.5■□□□□ 0.55
CLCF1-201ENST00000312438 RARRES1P49788 294 aa18.5■□□□□ 0.55
CLCF1-201ENST00000312438 BMT2Q1RMZ1 405 aa18.5■□□□□ 0.55
CLCF1-201ENST00000312438 EDRF1Q3B7T1 1238 aa18.5■□□□□ 0.55
CLCF1-201ENST00000312438 LRRC55Q6ZSA7 311 aa18.5■□□□□ 0.55
CLCF1-201ENST00000312438 MPHOSPH6Q99547 160 aaKnown RBP18.5■□□□□ 0.55
CLCF1-201ENST00000312438 NOC4LQ9BVI4 516 aaKnown RBP18.5■□□□□ 0.55
CLCF1-201ENST00000312438 ANKEF1Q9NU02 776 aa18.5■□□□□ 0.55
CLCF1-201ENST00000312438 SLC9A2Q9UBY0 812 aa18.5■□□□□ 0.55
CLCF1-201ENST00000312438 PTPRFP10586 1907 aa18.5■□□□□ 0.55
CLCF1-201ENST00000312438 CELF2O95319 508 aaKnown RBP18.49■□□□□ 0.55
CLCF1-201ENST00000312438 GNA14O95837 355 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 PSAPP07602 524 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 TPM1P09493 284 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 CASP5P51878 434 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 KCTD2Q14681 263 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 TC2NQ8N9U0 490 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 SHCBP1Q8NEM2 672 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 POLD4Q9HCU8 107 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 TRAF3IP3Q9Y228 551 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 PES1O00541 588 aaKnown RBP18.49■□□□□ 0.55
CLCF1-201ENST00000312438 GCNT3O95395 438 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 MYBP10242 640 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 KCNJ6P48051 423 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 ADKP55263 362 aaKnown RBP18.49■□□□□ 0.55
CLCF1-201ENST00000312438 ERVK-9P63128 1117 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 ERVK-24P63145 666 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 RBL2Q08999 1139 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 FSTL1Q12841 308 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 TRIM14Q14142 442 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 ATP6V0A1Q93050 837 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 TIPINQ9BVW5 301 aa18.49■□□□□ 0.55
CLCF1-201ENST00000312438 CCL15-CCL14A0A0B4J2E2 113 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 PDHXO00330 501 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 PDXKO00764 312 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 EIF3DO15371 548 aaKnown RBP eCLIP18.48■□□□□ 0.55
CLCF1-201ENST00000312438 OFD1O75665 1012 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 CYP2C8P10632 490 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 TBC1D8BQ0IIM8 1120 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 ADAM9Q13443 819 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 CCL15Q16663 113 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 UGCGQ16739 394 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 SEPT14Q6ZU15 432 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 STXBP4Q6ZWJ1 553 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 OTUD6AQ7L8S5 288 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 ZNF720Q7Z2F6 126 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 CCDC43Q96MW1 224 aaKnown RBP18.48■□□□□ 0.55
CLCF1-201ENST00000312438 MMP19Q99542 508 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 KCND1Q9NSA2 647 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 A0A0G2JMZ2 1700 aa18.48■□□□□ 0.55
CLCF1-201ENST00000312438 CALUO43852 315 aaPredicted RBP18.47■□□□□ 0.55
CLCF1-201ENST00000312438 HIP1RO75146 1068 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 PRPF6O94906 941 aaKnown RBP18.47■□□□□ 0.55
CLCF1-201ENST00000312438 TGFB3P10600 412 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 ACTR2P61160 394 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 SP2Q02086 613 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 VWA3BQ502W6 1294 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 MIIPQ5JXC2 388 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 ODR4Q5SWX8 454 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 MIS18BP1Q6P0N0 1132 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 ABHD15Q6UXT9 468 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 ANKRD23Q86SG2 305 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 CNGA4Q8IV77 575 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 FAM178BQ8IXR5 827 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 ZC3H3Q8IXZ2 948 aaKnown RBP18.47■□□□□ 0.55
CLCF1-201ENST00000312438 GPRC5AQ8NFJ5 357 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 SMCR8Q8TEV9 937 aaPredicted RBP18.47■□□□□ 0.55
CLCF1-201ENST00000312438 CPLX3Q8WVH0 158 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 PANX2Q96RD6 677 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 BAG1Q99933 345 aaPredicted RBP18.47■□□□□ 0.55
CLCF1-201ENST00000312438 R3HDMLQ9H3Y0 253 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 BCAS3Q9H6U6 928 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 GABBR1Q9UBS5 961 aa18.47■□□□□ 0.55
CLCF1-201ENST00000312438 DNAJC25-GNG10A0A024R161 153 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 BTBD19C9JJ37 291 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 CETN3O15182 167 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 STX10O60499 249 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 ZBTB48P10074 688 aaPredicted RBP18.46■□□□□ 0.55
CLCF1-201ENST00000312438 CCNA1P78396 465 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 GOLGA8FQ08AF8 430 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 GOLGA8DPQ0D2H9 430 aa18.46■□□□□ 0.55
CLCF1-201ENST00000312438 MAN2A1Q16706 1144 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms