RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 HSPA9P38646 679 aaKnown RBP20.64■□□□□ 0.89
HERPUD2-201ENST00000311350 ELF3P78545 371 aaPredicted RBP20.64■□□□□ 0.89
HERPUD2-201ENST00000311350 LETM2Q2VYF4 491 aa20.64■□□□□ 0.89
HERPUD2-201ENST00000311350 RNF10Q8N5U6 811 aaKnown RBP20.64■□□□□ 0.89
HERPUD2-201ENST00000311350 MAGEC3Q8TD91 643 aa20.64■□□□□ 0.89
HERPUD2-201ENST00000311350 STAMBPL1Q96FJ0 436 aa20.64■□□□□ 0.89
HERPUD2-201ENST00000311350 PSMD1Q99460 953 aa20.64■□□□□ 0.89
HERPUD2-201ENST00000311350 A0A1B0GUA9 196 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 GOLGA6L10A6NI86 522 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 NOVP48745 357 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 ERVK-9P63128 1117 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 ZNF844Q08AG5 666 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 XRCC4Q13426 336 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 ODF2Q5BJF6 829 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 DPY19L2Q6NUT2 758 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 SH3RF3Q8TEJ3 882 aaPredicted RBP20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 WHAMMQ8TF30 809 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 THOC1Q96FV9 657 aaKnown RBP20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 NOX5Q96PH1 765 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 MTMR9Q96QG7 549 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 NUCKS1Q9H1E3 243 aaKnown RBP20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 RIC8AQ9NPQ8 531 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 ATP6V1G2O95670 118 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 ECHS1P30084 290 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 CDC25CP30307 473 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 FLT3P36888 993 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 CCDC50Q8IVM0 306 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 CACNA2D3Q8IZS8 1091 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 NEDD1Q8NHV4 660 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 CCT6BQ92526 530 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 TMX4Q9H1E5 349 aaPredicted RBP20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 NEUROG2Q9H2A3 272 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 RRAGCQ9HB90 399 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 NOD2Q9HC29 1040 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 ATP6V0A2Q9Y487 856 aa20.63■□□□□ 0.89
HERPUD2-201ENST00000311350 BBOX1O75936 387 aa20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 GRB10Q13322 594 aa20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 HIBCHQ6NVY1 386 aaPredicted RBP20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 SLC51AQ86UW1 340 aa20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 SYN2Q92777 582 aaPredicted RBP20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 PLCB1Q9NQ66 1216 aa20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 BLOC1S4Q9NUP1 217 aa20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 NOVA2Q9UNW9 492 aaKnown RBP20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 RBAK-RBAKDNI3L0D1 243 aa20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 GRAPQ13588 217 aa20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 PDIA5Q14554 519 aa20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 SEPT2Q15019 361 aa20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 ASTE1Q2TB18 679 aaPredicted RBP20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 FMNL3Q8IVF7 1028 aa20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 C1orf131Q8NDD1 294 aaKnown RBP20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 MDM1Q8TC05 714 aa20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 GRAPLQ8TC17 118 aaPredicted RBP20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 BAP1Q92560 729 aa20.62■□□□□ 0.89
HERPUD2-201ENST00000311350 TOMM70O94826 608 aa20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 TECP42680 631 aa20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 EHHADHQ08426 723 aa20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 PTPROQ16827 1216 aa20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 LACTB2Q53H82 288 aaPredicted RBP20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 PDXDC1Q6P996 788 aa20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 C15orf52Q6ZUT6 534 aaKnown RBP20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 C16orf86Q6ZW13 317 aa20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 RAB34Q9BZG1 259 aa20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 SEC63Q9UGP8 760 aaKnown RBP20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 L3MBTL1Q9Y468 752 aa20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 EME2A4GXA9 379 aaPredicted RBP20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 SRRM3A6NNA2 597 aaPredicted RBP20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 CTNNA1P35221 906 aaKnown RBP20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 TMEM266Q2M3C6 531 aa20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 ARFGAP2Q8N6H7 521 aa20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 LARP4BQ92615 738 aaKnown RBP20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 TATDN2Q93075 761 aa20.61■□□□□ 0.89
HERPUD2-201ENST00000311350 F8W031 263 aaPredicted RBP20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 SLC8A1P32418 973 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 MYO1EQ12965 1108 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 PPP1R7Q15435 360 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 REXO1Q8N1G1 1221 aaKnown RBP20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 TBCKQ8TEA7 893 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 NSMCE1Q8WV22 266 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 PNMA5Q96PV4 448 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 TSG101Q99816 390 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 STX8Q9UNK0 236 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 C5orf60A6NFR6 353 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 MYMKA6NI61 221 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 INHBEP58166 350 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 PPP2R2AP63151 447 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 LRRC55Q6ZSA7 311 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 CPLX4Q7Z7G2 160 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 EGFL6Q8IUX8 553 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 TAF1DQ9H5J8 278 aaPredicted RBP20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 SLC39A2Q9NP94 309 aa20.6■□□□□ 0.89
HERPUD2-201ENST00000311350 MAGOHP61326 146 aaKnown RBP20.59■□□□□ 0.89
HERPUD2-201ENST00000311350 TMEM119Q4V9L6 283 aa20.59■□□□□ 0.89
HERPUD2-201ENST00000311350 RAD54LQ92698 747 aa20.59■□□□□ 0.89
HERPUD2-201ENST00000311350 MAGOHBQ96A72 148 aaKnown RBP20.59■□□□□ 0.89
HERPUD2-201ENST00000311350 INPP4AQ96PE3 977 aaPredicted RBP20.59■□□□□ 0.89
HERPUD2-201ENST00000311350 RIOX1Q9H6W3 641 aa20.59■□□□□ 0.89
HERPUD2-201ENST00000311350 DICER1Q9UPY3 1922 aaKnown RBP20.59■□□□□ 0.89
HERPUD2-201ENST00000311350 DDX60LQ5H9U9 1706 aaKnown RBP20.59■□□□□ 0.89
HERPUD2-201ENST00000311350 PPIP5K2O43314 1243 aa20.59■□□□□ 0.89
HERPUD2-201ENST00000311350 DRD4P21917 467 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms