RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 GRIN2DO15399 1336 aa20.05■□□□□ 0.8
SSSCA1-201ENST00000309328 MKI67P46013 3256 aaKnown RBP20.05■□□□□ 0.8
SSSCA1-201ENST00000309328 MARK3P27448 753 aa20.05■□□□□ 0.8
SSSCA1-201ENST00000309328 ATN1P54259 1190 aaPredicted RBP20.05■□□□□ 0.8
SSSCA1-201ENST00000309328 RTP1P59025 263 aa20.05■□□□□ 0.8
SSSCA1-201ENST00000309328 DNM1Q05193 864 aaKnown RBP20.05■□□□□ 0.8
SSSCA1-201ENST00000309328 ZNF579Q8NAF0 562 aaKnown RBP20.05■□□□□ 0.8
SSSCA1-201ENST00000309328 RNPEPQ9H4A4 650 aa20.05■□□□□ 0.8
SSSCA1-201ENST00000309328 HDAC6Q9UBN7 1215 aa20.05■□□□□ 0.8
SSSCA1-201ENST00000309328 NOD1Q9Y239 953 aa20.05■□□□□ 0.8
SSSCA1-201ENST00000309328 SLITRK3O94933 977 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 UBA7P41226 1012 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 CHMP4BP1P59074 171 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 GRIK4Q16099 956 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 CSPP1Q1MSJ5 1256 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 LRRC26Q2I0M4 334 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 TAF2Q6P1X5 1199 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 TPH2Q8IWU9 490 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 FAM126BQ8IXS8 530 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 BANK1Q8NDB2 785 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 SNX29Q8TEQ0 813 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 DYDC2Q96IM9 177 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 NACC1Q96RE7 527 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 JPH2Q9BR39 696 aaPredicted RBP20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 NIFKQ9BYG3 293 aaKnown RBP20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 FTOQ9C0B1 505 aaKnown RBP eCLIP20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 TFIP11Q9UBB9 837 aaKnown RBP20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 FBXO2Q9UK22 296 aaPredicted RBP20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 RCOR1Q9UKL0 485 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 DNAH12Q6ZR08 3092 aa20.04■□□□□ 0.8
SSSCA1-201ENST00000309328 MAGEB2O15479 319 aa20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 PQBP1O60828 265 aaKnown RBP20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 NCLP19338 710 aaKnown RBP20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 MARCKSP29966 332 aaPredicted RBP20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 CCT6AP40227 531 aaKnown RBP20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 CYP4A11Q02928 519 aa20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 IL17AQ16552 155 aa20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 TRIM60Q495X7 471 aa20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 ZNF710Q8N1W2 664 aa20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 CCDC155Q8N6L0 562 aa20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 CDK5RAP3Q96JB5 506 aa20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 CCDC43Q96MW1 224 aaKnown RBP20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 ANKEF1Q9NU02 776 aa20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 ATP11BQ9Y2G3 1177 aa20.03■□□□□ 0.8
SSSCA1-201ENST00000309328 MBLAC1A4D2B0 266 aaPredicted RBP20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 ZNF862O60290 1169 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 EVI5O60447 810 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 CUTAO60888 179 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 CAND2O75155 1236 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 CD4P01730 458 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 INSRRP14616 1297 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 YWHABP31946 246 aaKnown RBP20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 ME1P48163 572 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 TLE2Q04725 743 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 PTGISQ16647 500 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 UGCGQ16739 394 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 FOXD4L6Q3SYB3 417 aaPredicted RBP20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 HYIQ5T013 277 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 FOXD4L3Q6VB84 417 aaPredicted RBP20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 CATSPER3Q86XQ3 398 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 LMBR1Q8WVP7 490 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 CALML4Q96GE6 196 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 SPATA32Q96LK8 384 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 CCSER1Q9C0I3 900 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 RGL1Q9NZL6 768 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 PRKAG2Q9UGJ0 569 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 SEPT9Q9UHD8 586 aaPredicted RBP20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 NR2E3Q9Y5X4 410 aa20.02■□□□□ 0.8
SSSCA1-201ENST00000309328 GAS2O43903 313 aaKnown RBP20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 B4GALT4O60513 344 aa20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 CLTBP09497 229 aa20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 SPATA31C1P0DKV0 1188 aa20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 ATP4AP20648 1035 aa20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 ADAM17P78536 824 aa20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 PTK7Q13308 1070 aa20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 CTTNQ14247 550 aaKnown RBP20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 RSPH3Q86UC2 560 aa20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 RETREG2Q8NC44 543 aa20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 CAGE1Q8TC20 777 aa20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 CCDC39Q9UFE4 941 aa20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 TUBE1Q9UJT0 475 aa20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 DBR1Q9UK59 544 aaKnown RBP20.01■□□□□ 0.79
SSSCA1-201ENST00000309328 DDX11L8A8MPP1 907 aa20■□□□□ 0.79
SSSCA1-201ENST00000309328 RFC5P40937 340 aa20■□□□□ 0.79
SSSCA1-201ENST00000309328 BFSP2Q13515 415 aa20■□□□□ 0.79
SSSCA1-201ENST00000309328 GDF6Q6KF10 455 aaPredicted RBP20■□□□□ 0.79
SSSCA1-201ENST00000309328 CABP7Q86V35 215 aa20■□□□□ 0.79
SSSCA1-201ENST00000309328 SERINC5Q86VE9 423 aa20■□□□□ 0.79
SSSCA1-201ENST00000309328 RASSF8Q8NHQ8 419 aa20■□□□□ 0.79
SSSCA1-201ENST00000309328 LEO1Q8WVC0 666 aaPredicted RBP20■□□□□ 0.79
SSSCA1-201ENST00000309328 DPF3Q92784 378 aa20■□□□□ 0.79
SSSCA1-201ENST00000309328 PYM1Q9BRP8 204 aaKnown RBP20■□□□□ 0.79
SSSCA1-201ENST00000309328 CSRNP2Q9H175 543 aa20■□□□□ 0.79
SSSCA1-201ENST00000309328 SETD4Q9NVD3 440 aa20■□□□□ 0.79
SSSCA1-201ENST00000309328 DNM3Q9UQ16 869 aa20■□□□□ 0.79
SSSCA1-201ENST00000309328 DOCK5Q9H7D0 1870 aa20■□□□□ 0.79
SSSCA1-201ENST00000309328 PITPNM1O00562 1244 aa19.99■□□□□ 0.79
SSSCA1-201ENST00000309328 MED24O75448 989 aa19.99■□□□□ 0.79
SSSCA1-201ENST00000309328 TMOD1P28289 359 aa19.99■□□□□ 0.79
SSSCA1-201ENST00000309328 TBC1D8BQ0IIM8 1120 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms