RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 TMEM139Q8IV31 216 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 ZNF507Q8TCN5 953 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 PIGOQ8TEQ8 1089 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 SCFD1Q8WVM8 642 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 TSG101Q99816 390 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 PKD2L1Q9P0L9 805 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 BTBD7Q9P203 1132 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 FBXO40Q9UH90 709 aa13.17□□□□□ -0.3
TRIM40-205ENST00000307859 PFASO15067 1338 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 A0A1W2PQC6 194 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 TESPA1A2RU30 521 aaPredicted RBP13.16□□□□□ -0.3
TRIM40-205ENST00000307859 UNCXA6NJT0 531 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 MAFGO15525 162 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 ATP9AO75110 1047 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 LYPLA2O95372 231 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 P4HBP07237 508 aaKnown RBP13.16□□□□□ -0.3
TRIM40-205ENST00000307859 GAP43P17677 238 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 JAK3P52333 1124 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 IRX3P78415 501 aaPredicted RBP13.16□□□□□ -0.3
TRIM40-205ENST00000307859 KRT76Q01546 638 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 RAD51AP2Q09MP3 1159 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 NLRX1Q86UT6 975 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 ZC3H3Q8IXZ2 948 aaKnown RBP13.16□□□□□ -0.3
TRIM40-205ENST00000307859 BANK1Q8NDB2 785 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 SLC17A8Q8NDX2 589 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 RDM1Q8NG50 284 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 OPTNQ96CV9 577 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 IWS1Q96ST2 819 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 TUBGCP2Q9BSJ2 902 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 CFHR5Q9BXR6 569 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 ASCC2Q9H1I8 757 aaPredicted RBP13.16□□□□□ -0.3
TRIM40-205ENST00000307859 KCTD10Q9H3F6 313 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 ZSWIM4Q9H7M6 989 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 OLFML3Q9NRN5 406 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 TBC1D7Q9P0N9 293 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.16□□□□□ -0.3
TRIM40-205ENST00000307859 COLQQ9Y215 455 aaPredicted RBP13.16□□□□□ -0.3
TRIM40-205ENST00000307859 COL4A3BPQ9Y5P4 624 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 PLXNB2O15031 1838 aa13.16□□□□□ -0.3
TRIM40-205ENST00000307859 RSPH10B2B2RC85 870 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 TBCAO75347 108 aaKnown RBP13.15□□□□□ -0.3
TRIM40-205ENST00000307859 RGS20O76081 388 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 TBC1D8O95759 1140 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 RSPH10BP0C881 870 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 SFNP31947 248 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 DNM2P50570 870 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 HERVK_113P62684 666 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 GOLGA8FQ08AF8 430 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 GOLGA8DPQ0D2H9 430 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 TRIM14Q14142 442 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 BMT2Q1RMZ1 405 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRIM40-205ENST00000307859 DNERQ8NFT8 737 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 PANX2Q96RD6 677 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 SENP7Q9BQF6 1050 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 SPATC1LQ9H0A9 340 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 DBR1Q9UK59 544 aaKnown RBP13.15□□□□□ -0.3
TRIM40-205ENST00000307859 ODF2LQ9ULJ1 636 aa13.15□□□□□ -0.3
TRIM40-205ENST00000307859 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRIM40-205ENST00000307859 NFASCO94856 1347 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 WDR64B1ANS9 1081 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 AKR1B15C9JRZ8 316 aaPredicted RBP13.14□□□□□ -0.31
TRIM40-205ENST00000307859 ZBTB39O15060 712 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 FKTNO75072 461 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 MFAP3LO75121 409 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 CNMDO75829 334 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 CCNE2O96020 404 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 GYPCP04921 128 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 TPM2P07951 284 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 KCNA2P16389 499 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 GUCY2CP25092 1073 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 QARSP47897 775 aaKnown RBP13.14□□□□□ -0.31
TRIM40-205ENST00000307859 TM4SF4P48230 202 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 CASP5P51878 434 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 ZNF131P52739 623 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 FKBP3Q00688 224 aaKnown RBP13.14□□□□□ -0.31
TRIM40-205ENST00000307859 UBXN1Q04323 297 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 RBL2Q08999 1139 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 MIIPQ5JXC2 388 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 ZNF746Q6NUN9 644 aaPredicted RBP13.14□□□□□ -0.31
TRIM40-205ENST00000307859 FASTKD5Q7L8L6 764 aaKnown RBP13.14□□□□□ -0.31
TRIM40-205ENST00000307859 PPFIBP1Q86W92 1011 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 CREBRFQ8IUR6 639 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 CDHR1Q96JP9 859 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 CEP63Q96MT8 703 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 ZHX3Q9H4I2 956 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 ASTN1O14525 1302 aa13.14□□□□□ -0.31
TRIM40-205ENST00000307859 ARHGEF35A5YM69 484 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 STX10O60499 249 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 FAM13AO94988 1023 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 FECHP22830 423 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 GJA5P36382 358 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 MTIF2P46199 727 aaKnown RBP13.13□□□□□ -0.31
TRIM40-205ENST00000307859 ADKP55263 362 aaKnown RBP13.13□□□□□ -0.31
TRIM40-205ENST00000307859 EDRF1Q3B7T1 1238 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 CEP135Q66GS9 1140 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 E4F1Q66K89 784 aaPredicted RBP13.13□□□□□ -0.31
TRIM40-205ENST00000307859 GPAT2Q6NUI2 795 aa13.13□□□□□ -0.31
TRIM40-205ENST00000307859 C4orf19Q8IY42 314 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms