RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 C3P01024 1663 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 A0A087WWV3 80 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 MESDQ14696 234 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 TKFCQ3LXA3 575 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 SAMD15Q9P1V8 674 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 PCDHB7Q9Y5E2 793 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 GOLGA8CPA6NN73 597 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 GNASQ5JWF2 1037 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 CTAGE3PQ8IX95 158 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 KCTD6Q8NC69 237 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 FANCLQ9NW38 375 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 BARHL2Q9NY43 387 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 POLLQ9UGP5 575 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 SRPRBQ9Y5M8 271 aaKnown RBP11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 KIF1AQ12756 1690 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 SRGAP2BP0DMP2 458 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 RGS2P41220 211 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 VPS41P49754 854 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 MXI1P50539 228 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 CCDC6Q16204 474 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 ZNF667Q5HYK9 610 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 LXNQ9BS40 222 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 RBSNQ9H1K0 784 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 POLR3EQ9NVU0 708 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 MOSPD1Q9UJG1 213 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 USP32Q8NFA0 1604 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 MAPK4P31152 587 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 GBP1P32455 592 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 ZNF699Q32M78 642 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 ARL13BQ3SXY8 428 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 STAG2Q8N3U4 1231 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 GRK7Q8WTQ7 553 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 ATP2A3Q93084 1043 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 OPTNQ96CV9 577 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 MKRN1Q9UHC7 482 aaKnown RBP11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 MYO1FO00160 1098 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 P4HBP07237 508 aaKnown RBP11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 ADCY8P40145 1251 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 TTC30BQ8N4P2 665 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 FAM20AQ96MK3 541 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 FAM213AQ9BRX8 229 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 TADA2AO75478 443 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 ARL4AP40617 200 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 STAT5BP51692 787 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 EPHB1P54762 984 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 CDO1Q16878 200 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 IER5Q5VY09 327 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 SCYL1Q96KG9 808 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 ANAPC4Q9UJX5 808 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 SGK1O00141 431 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 COPB1P53618 953 aaKnown RBP11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 PSMC5P62195 406 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 FKBP3Q00688 224 aaKnown RBP11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 DNAJC24Q6P3W2 148 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 CLEC10AQ8IUN9 316 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 MTMR4Q9NYA4 1195 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 CYP27A1Q02318 531 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 MAP1SQ66K74 1059 aaPredicted RBP11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 NEDD1Q8NHV4 660 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 TRIM11Q96F44 468 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 PHLPP1O60346 1717 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 NDUFB10O96000 172 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 EPSTI1Q96J88 318 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 GSDMAQ96QA5 445 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 SUCLA2Q9P2R7 463 aaPredicted RBP11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 FAM184BQ9ULE4 1060 aa11.59□□□□□ -0.55
SYNPO2-201ENST00000307142 GGPS1O95749 300 aa11.58□□□□□ -0.55
SYNPO2-201ENST00000307142 NECTIN1Q15223 517 aa11.58□□□□□ -0.55
SYNPO2-201ENST00000307142 DGKDQ16760 1214 aa11.58□□□□□ -0.55
SYNPO2-201ENST00000307142 ZNF394Q53GI3 561 aa11.58□□□□□ -0.55
SYNPO2-201ENST00000307142 PRIMPOLQ96LW4 560 aa11.58□□□□□ -0.55
SYNPO2-201ENST00000307142 GFPT2O94808 682 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 VEPH1Q14D04 833 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 EIF2AK1Q9BQI3 630 aaKnown RBP11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 SMARCAD1Q9H4L7 1026 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 POLD4Q9HCU8 107 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 MEGF6O75095 1541 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 RGL2O15211 777 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 ORC4O43929 436 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 ACTN1P12814 892 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 ZNF148Q9UQR1 794 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 PCDHA10Q9Y5I2 948 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 MAD1L1Q9Y6D9 718 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 BZW2Q9Y6E2 419 aaKnown RBP11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 ERCC6LQ2NKX8 1250 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 SCYL3Q8IZE3 742 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 TRIM56Q9BRZ2 755 aaKnown RBP11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 VCPKMTQ9H867 229 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 LMBRD1Q9NUN5 540 aa11.58□□□□□ -0.56
SYNPO2-201ENST00000307142 PNPLA7Q6ZV29 1317 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 ZNF521Q96K83 1311 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 POTEB3A0JP26 581 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 POTEFA5A3E0 1075 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 POTECB2RU33 542 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 KRIT1O00522 736 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 MYL1P05976 194 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 POTEIP0CG38 1075 aa11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 RECQLP46063 649 aaPredicted RBP11.57□□□□□ -0.56
SYNPO2-201ENST00000307142 ARL6IP4Q66PJ3 421 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms