RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 PDCD2LQ9BRP1 358 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 NUP58Q9BVL2 599 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 ASTN1O14525 1302 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 ATAD5Q96QE3 1844 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 ARHGEF35A5YM69 484 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 ENC1O14682 589 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 ODR4Q5SWX8 454 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 B3GNT9Q6UX72 402 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 CACNA2D4Q7Z3S7 1137 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 TRIM59Q8IWR1 403 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 MNS1Q8NEH6 495 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 ZNF397Q8NF99 534 aaPredicted RBP12.55□□□□□ -0.4
SCG2-201ENST00000305409 NACC1Q96RE7 527 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 JADE2Q9NQC1 790 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 PXMP2Q9NR77 195 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 ARHGAP20Q9P2F6 1191 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 UBIAD1Q9Y5Z9 338 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 TISP43B9A030 160 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 ZNF263O14978 683 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 HIP1RO75146 1068 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 POLR2FP61218 127 aaKnown RBP12.55□□□□□ -0.4
SCG2-201ENST00000305409 KCNH2Q12809 1159 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 MEA1Q16626 185 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 PCNX4Q63HM2 1172 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 KIAA1328Q86T90 577 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 GPC2Q8N158 579 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 RDH13Q8NBN7 331 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 NEK11Q8NG66 645 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 PARVGQ9HBI0 331 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 AS3MTQ9HBK9 375 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 GPRC5CQ9NQ84 441 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 RNF181Q9P0P0 153 aa12.55□□□□□ -0.4
SCG2-201ENST00000305409 PUF60Q9UHX1 559 aaKnown RBP12.55□□□□□ -0.4
SCG2-201ENST00000305409 TGFB1I1O43294 461 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 USO1O60763 962 aaKnown RBP12.54□□□□□ -0.4
SCG2-201ENST00000305409 USP2O75604 605 aaPredicted RBP12.54□□□□□ -0.4
SCG2-201ENST00000305409 NOL4O94818 638 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 CCNE2O96020 404 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 NR3C1P04150 777 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 EIF4A3P38919 411 aaKnown RBP12.54□□□□□ -0.4
SCG2-201ENST00000305409 NPEPPSP55786 919 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 CCDC122Q5T0U0 273 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 TREML2Q5T2D2 321 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 PLA2G4FQ68DD2 849 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 PADI6Q6TGC4 694 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 DAW1Q8N136 415 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 CEP63Q96MT8 703 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 POLR2AP24928 1970 aaKnown RBP12.54□□□□□ -0.4
SCG2-201ENST00000305409 SSC5DA1L4H1 1573 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 MACROD2A1Z1Q3 448 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 SPDYE4A6NLX3 237 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 SLC26A4O43511 780 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 SLC9A1P19634 815 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 DSG3P32926 999 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 CYP2J2P51589 502 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 MAP3K9P80192 1104 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 FSTL1Q12841 308 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 VGLL4Q14135 290 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.54□□□□□ -0.4
SCG2-201ENST00000305409 FAM178BQ8IXR5 827 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 ANKRD13CQ8N6S4 541 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 RETREG2Q8NC44 543 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 REPS2Q8NFH8 660 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 BAP1Q92560 729 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 CCDC42Q96M95 316 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 FIZ1Q96SL8 496 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 RIT2Q99578 217 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 HDAC6Q9UBN7 1215 aa12.54□□□□□ -0.4
SCG2-201ENST00000305409 ZNF214Q9UL59 606 aaPredicted RBP12.54□□□□□ -0.4
SCG2-201ENST00000305409 KIF20AO95235 890 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 SOX10P56693 466 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 R3HDMLQ9H3Y0 253 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 TMOD4Q9NZQ9 345 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 ARMCX3Q9UH62 379 aaPredicted RBP12.53□□□□□ -0.4
SCG2-201ENST00000305409 MRFAP1Q9Y605 127 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 TUBB4AP04350 444 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 NR3C2P08235 984 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 PPP2R3AQ06190 1150 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 FBXO38Q6PIJ6 1188 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 DNAAF5Q86Y56 855 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 DEF6Q9H4E7 631 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 TCEAL9Q9UHQ7 104 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 PLAGL2Q9UPG8 496 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 TRAF3IP3Q9Y228 551 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 AFG3L2Q9Y4W6 797 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 ZMYM2Q9UBW7 1377 aa12.53□□□□□ -0.4
SCG2-201ENST00000305409 RRP9O43818 475 aaKnown RBP12.52□□□□□ -0.4
SCG2-201ENST00000305409 P4HBP07237 508 aaKnown RBP12.52□□□□□ -0.4
SCG2-201ENST00000305409 CYLC1P35663 651 aaPredicted RBP12.52□□□□□ -0.4
SCG2-201ENST00000305409 GFPT1Q06210 699 aaPredicted RBP12.52□□□□□ -0.4
SCG2-201ENST00000305409 MAPK7Q13164 816 aa12.52□□□□□ -0.4
SCG2-201ENST00000305409 EDRF1Q3B7T1 1238 aa12.52□□□□□ -0.4
SCG2-201ENST00000305409 TDRD12Q587J7 1177 aaKnown RBP12.52□□□□□ -0.4
SCG2-201ENST00000305409 TEX35Q5T0J7 233 aa12.52□□□□□ -0.4
SCG2-201ENST00000305409 GJB7Q6PEY0 223 aa12.52□□□□□ -0.4
SCG2-201ENST00000305409 CATSPERGQ6ZRH7 1159 aa12.52□□□□□ -0.4
SCG2-201ENST00000305409 ZNF720Q7Z2F6 126 aa12.52□□□□□ -0.4
SCG2-201ENST00000305409 JAKMIP2Q96AA8 810 aa12.52□□□□□ -0.4
SCG2-201ENST00000305409 CLMNQ96JQ2 1002 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms