RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ITGA4P13612 1032 aa14.15□□□□□ -0.14
TRIM35-201ENST00000305364 MUM1Q2TAK8 710 aa14.15□□□□□ -0.14
TRIM35-201ENST00000305364 ADGRA1Q86SQ6 560 aa14.15□□□□□ -0.14
TRIM35-201ENST00000305364 PROM2Q8N271 834 aa14.15□□□□□ -0.14
TRIM35-201ENST00000305364 ERMNQ8TAM6 284 aa14.15□□□□□ -0.14
TRIM35-201ENST00000305364 RPGRQ92834 1020 aaKnown RBP14.15□□□□□ -0.14
TRIM35-201ENST00000305364 ARHGEF2Q92974 986 aaKnown RBP14.15□□□□□ -0.14
TRIM35-201ENST00000305364 TATDN2Q93075 761 aa14.15□□□□□ -0.14
TRIM35-201ENST00000305364 PIGSQ96S52 555 aa14.15□□□□□ -0.14
TRIM35-201ENST00000305364 TBK1Q9UHD2 729 aa14.15□□□□□ -0.14
TRIM35-201ENST00000305364 ANKRD62A6NC57 917 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 H0Y3Z8 333 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 LDHBP07195 334 aaKnown RBP14.14□□□□□ -0.15
TRIM35-201ENST00000305364 PDHA1P08559 390 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 RFC4P35249 363 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 PTK2Q05397 1052 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 COASYQ13057 564 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 PLVAPQ9BX97 442 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 BARHL2Q9NY43 387 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 FRMPD2Q68DX3 1309 aaPredicted RBP14.14□□□□□ -0.15
TRIM35-201ENST00000305364 CALUO43852 315 aaPredicted RBP14.14□□□□□ -0.15
TRIM35-201ENST00000305364 GCNT3O95395 438 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 CETN1Q12798 172 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 COA7Q96BR5 231 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 NT5C3AQ9H0P0 336 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 DNAJC17Q9NVM6 304 aaKnown RBP14.14□□□□□ -0.15
TRIM35-201ENST00000305364 TMEM260Q9NX78 707 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 IGF2BP3O00425 579 aaKnown RBP eCLIP14.14□□□□□ -0.15
TRIM35-201ENST00000305364 LDHCP07864 332 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 ACCSLQ4AC99 568 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 SUSD4Q5VX71 490 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 GBP7Q8N8V2 638 aaPredicted RBP14.14□□□□□ -0.15
TRIM35-201ENST00000305364 GJA10Q969M2 543 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 MMP14P50281 582 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 ZNF131P52739 623 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 MECOMQ03112 1051 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 ZBTB16Q05516 673 aa14.14□□□□□ -0.15
TRIM35-201ENST00000305364 DBR1Q9UK59 544 aaKnown RBP14.14□□□□□ -0.15
TRIM35-201ENST00000305364 NALCNQ8IZF0 1738 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 TCP11X1B4DZS4 312 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 FGFR4P22455 802 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 NBPF5PQ86XG9 351 aaPredicted RBP14.13□□□□□ -0.15
TRIM35-201ENST00000305364 DGKHQ86XP1 1220 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 RAD54LQ92698 747 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 TSC22D3Q99576 134 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 SH3GL3Q99963 347 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 ETNK1Q9HBU6 452 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 MEGF6O75095 1541 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 ATP2A2P16615 1042 aaKnown RBP14.13□□□□□ -0.15
TRIM35-201ENST00000305364 PLS1Q14651 629 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 TRMT1LQ7Z2T5 733 aaKnown RBP14.13□□□□□ -0.15
TRIM35-201ENST00000305364 ZBTB10Q96DT7 871 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 CALR3Q96L12 384 aaKnown RBP14.13□□□□□ -0.15
TRIM35-201ENST00000305364 EYA3Q99504 573 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 FAM129AQ9BZQ8 928 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.13□□□□□ -0.154e-7■■■■■ 57.7
TRIM35-201ENST00000305364 GCNT4Q9P109 453 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 DDX25Q9UHL0 483 aaKnown RBP14.13□□□□□ -0.15
TRIM35-201ENST00000305364 CLIC2O15247 247 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 FUT2Q10981 343 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 SLC29A2Q14542 456 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 FAM47EQ6ZV65 393 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 HS2ST1Q7LGA3 356 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 RDH13Q8NBN7 331 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 PIGBQ92521 554 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 GLG1Q92896 1179 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 TNFRSF25Q93038 417 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 VCXQ9H320 206 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 FGFR1OP2Q9NVK5 253 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 TRPC6Q9Y210 931 aa14.13□□□□□ -0.15
TRIM35-201ENST00000305364 MRPL12P52815 198 aaKnown RBP14.12□□□□□ -0.15
TRIM35-201ENST00000305364 MESDQ14696 234 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 SLC44A5Q8NCS7 719 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 RUNDC3BQ96NL0 473 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 ANAPC4Q9UJX5 808 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 LAMA4Q16363 1823 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 C6orf229H3BNL8 230 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 UBOX5O94941 541 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 FAM13AO94988 1023 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 SLC9A1P19634 815 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 HNRNPH3P31942 346 aaKnown RBP14.12□□□□□ -0.15
TRIM35-201ENST00000305364 INPP4AQ96PE3 977 aaPredicted RBP14.12□□□□□ -0.15
TRIM35-201ENST00000305364 CNOT8Q9UFF9 292 aaKnown RBP14.12□□□□□ -0.15
TRIM35-201ENST00000305364 DCDC2CA8MYV0 355 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 F8VZ95 297 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 TDP2O95551 362 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 GJC1P36383 396 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 PARP10Q53GL7 1025 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.12□□□□□ -0.15
TRIM35-201ENST00000305364 C15orf41Q9Y2V0 281 aa14.12□□□□□ -0.15
TRIM35-201ENST00000305364 E9PMD0 336 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 THAP12O43422 761 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 C21orf2O43822 256 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 GHRP10912 638 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 FERP16591 822 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 PRDX5P30044 214 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 ZNF449Q6P9G9 518 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 TMC3Q7Z5M5 1100 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 VGLL2Q8N8G2 317 aa14.11□□□□□ -0.15
TRIM35-201ENST00000305364 PPFIBP2Q8ND30 876 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms