RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 CKAP2LQ8IYA6 745 aa29.91■■■□□ 2.38
CDKN2A-201ENST00000304494 IFIH1Q9BYX4 1025 aaKnown RBP29.91■■■□□ 2.38
CDKN2A-201ENST00000304494 MAFBQ9Y5Q3 323 aaPredicted RBP29.91■■■□□ 2.38
CDKN2A-201ENST00000304494 CCDC194A0A1B0GVG4 234 aa29.9■■■□□ 2.38
CDKN2A-201ENST00000304494 GJB5O95377 273 aa29.9■■■□□ 2.38
CDKN2A-201ENST00000304494 C8orf34Q49A92 452 aa29.9■■■□□ 2.38
CDKN2A-201ENST00000304494 ZNF484Q5JVG2 852 aa29.9■■■□□ 2.38
CDKN2A-201ENST00000304494 LRCH2Q5VUJ6 765 aa29.9■■■□□ 2.38
CDKN2A-201ENST00000304494 IER5Q5VY09 327 aa29.9■■■□□ 2.38
CDKN2A-201ENST00000304494 TRAPPC12Q8WVT3 735 aa29.9■■■□□ 2.38
CDKN2A-201ENST00000304494 SLC5A5Q92911 643 aa29.9■■■□□ 2.38
CDKN2A-201ENST00000304494 TEKT3Q9BXF9 490 aa29.9■■■□□ 2.38
CDKN2A-201ENST00000304494 FAM49AQ9H0Q0 323 aaPredicted RBP29.9■■■□□ 2.38
CDKN2A-201ENST00000304494 EYSQ5T1H1 3165 aa29.9■■■□□ 2.38
CDKN2A-201ENST00000304494 M0QZ92 97 aa29.89■■■□□ 2.38
CDKN2A-201ENST00000304494 TDP2O95551 362 aa29.89■■■□□ 2.38
CDKN2A-201ENST00000304494 MRPS6P82932 125 aaKnown RBP29.89■■■□□ 2.38
CDKN2A-201ENST00000304494 MKRN4PQ13434 485 aaPredicted RBP29.89■■■□□ 2.38
CDKN2A-201ENST00000304494 MTHFD1LQ6UB35 978 aa29.89■■■□□ 2.38
CDKN2A-201ENST00000304494 BBXQ8WY36 941 aaPredicted RBP29.89■■■□□ 2.38
CDKN2A-201ENST00000304494 ZBTB10Q96DT7 871 aa29.89■■■□□ 2.38
CDKN2A-201ENST00000304494 RAD9AQ99638 391 aa29.89■■■□□ 2.38
CDKN2A-201ENST00000304494 SMIM35A0A1B0GVV1 85 aa29.88■■■□□ 2.37
CDKN2A-201ENST00000304494 SFNP31947 248 aa29.88■■■□□ 2.37
CDKN2A-201ENST00000304494 INF2Q27J81 1249 aa29.88■■■□□ 2.37
CDKN2A-201ENST00000304494 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.88■■■□□ 2.37
CDKN2A-201ENST00000304494 TMCO2Q7Z6W1 182 aaPredicted RBP29.88■■■□□ 2.37
CDKN2A-201ENST00000304494 NME8Q8N427 588 aa29.88■■■□□ 2.37
CDKN2A-201ENST00000304494 MBOAT7Q96N66 472 aa29.88■■■□□ 2.37
CDKN2A-201ENST00000304494 OSBPL7Q9BZF2 842 aa29.88■■■□□ 2.37
CDKN2A-201ENST00000304494 DISC1Q9NRI5 854 aa29.88■■■□□ 2.37
CDKN2A-201ENST00000304494 GABBR1Q9UBS5 961 aa29.88■■■□□ 2.37
CDKN2A-201ENST00000304494 CDY2AQ9Y6F7 541 aa29.88■■■□□ 2.37
CDKN2A-201ENST00000304494 GHRP10912 638 aa29.87■■■□□ 2.37
CDKN2A-201ENST00000304494 FDPSP14324 419 aaKnown RBP29.87■■■□□ 2.37
CDKN2A-201ENST00000304494 ATP4AP20648 1035 aa29.87■■■□□ 2.37
CDKN2A-201ENST00000304494 KLRC1P26715 233 aa29.87■■■□□ 2.37
CDKN2A-201ENST00000304494 JAK3P52333 1124 aa29.87■■■□□ 2.37
CDKN2A-201ENST00000304494 MYOCDQ8IZQ8 938 aa29.87■■■□□ 2.37
CDKN2A-201ENST00000304494 NSUN7Q8NE18 718 aaKnown RBP29.87■■■□□ 2.37
CDKN2A-201ENST00000304494 FAM167AQ96KS9 214 aa29.87■■■□□ 2.37
CDKN2A-201ENST00000304494 BRMS1Q9HCU9 246 aa29.87■■■□□ 2.37
CDKN2A-201ENST00000304494 DDX25Q9UHL0 483 aaKnown RBP29.87■■■□□ 2.37
CDKN2A-201ENST00000304494 PTPRSQ13332 1948 aa29.86■■■□□ 2.37
CDKN2A-201ENST00000304494 TAP1Q03518 808 aa29.86■■■□□ 2.37
CDKN2A-201ENST00000304494 LPIN1Q14693 890 aa29.86■■■□□ 2.37
CDKN2A-201ENST00000304494 LETM2Q2VYF4 491 aa29.86■■■□□ 2.37
CDKN2A-201ENST00000304494 NEK8Q86SG6 692 aa29.86■■■□□ 2.37
CDKN2A-201ENST00000304494 USP38Q8NB14 1042 aa29.86■■■□□ 2.37
CDKN2A-201ENST00000304494 RDM1Q8NG50 284 aa29.86■■■□□ 2.37
CDKN2A-201ENST00000304494 NAP1L4Q99733 375 aaKnown RBP29.86■■■□□ 2.37
CDKN2A-201ENST00000304494 GJB4Q9NTQ9 266 aa29.86■■■□□ 2.37
CDKN2A-201ENST00000304494 CEP131Q9UPN4 1083 aa29.86■■■□□ 2.37
CDKN2A-201ENST00000304494 LIMCH1Q9UPQ0 1083 aa29.86■■■□□ 2.37
CDKN2A-201ENST00000304494 TRPV2Q9Y5S1 764 aa29.86■■■□□ 2.37
CDKN2A-201ENST00000304494 IGSF9BQ9UPX0 1349 aa29.86■■■□□ 2.37
CDKN2A-201ENST00000304494 DTNBO60941 627 aa29.85■■■□□ 2.37
CDKN2A-201ENST00000304494 PSMD10O75832 226 aa29.85■■■□□ 2.37
CDKN2A-201ENST00000304494 GCFC2P16383 781 aaKnown RBP29.85■■■□□ 2.37
CDKN2A-201ENST00000304494 FBXO47Q5MNV8 452 aa29.85■■■□□ 2.37
CDKN2A-201ENST00000304494 TSHZ1Q6ZSZ6 1077 aa29.85■■■□□ 2.37
CDKN2A-201ENST00000304494 UNC45AQ9H3U1 944 aa29.85■■■□□ 2.37
CDKN2A-201ENST00000304494 CHD7Q9P2D1 2997 aa29.85■■■□□ 2.37
CDKN2A-201ENST00000304494 INSL6Q9Y581 213 aa29.85■■■□□ 2.37
CDKN2A-201ENST00000304494 SQORQ9Y6N5 450 aa29.85■■■□□ 2.37
CDKN2A-201ENST00000304494 CHMP2AO43633 222 aa29.84■■■□□ 2.37
CDKN2A-201ENST00000304494 KRT2P35908 639 aa29.84■■■□□ 2.37
CDKN2A-201ENST00000304494 PPP4R3AQ6IN85 833 aa29.84■■■□□ 2.37
CDKN2A-201ENST00000304494 FAM117BQ6P1L5 589 aa29.84■■■□□ 2.37
CDKN2A-201ENST00000304494 PIK3AP1Q6ZUJ8 805 aa29.84■■■□□ 2.37
CDKN2A-201ENST00000304494 ETNPPLQ8TBG4 499 aa29.84■■■□□ 2.37
CDKN2A-201ENST00000304494 MICAL3Q7RTP6 2002 aa29.84■■■□□ 2.37
CDKN2A-201ENST00000304494 ZBTB42B2RXF5 422 aa29.83■■■□□ 2.37
CDKN2A-201ENST00000304494 IGFBP4P22692 258 aa29.83■■■□□ 2.37
CDKN2A-201ENST00000304494 TRIM29Q14134 588 aa29.83■■■□□ 2.37
CDKN2A-201ENST00000304494 ADGRE1Q14246 886 aa29.83■■■□□ 2.37
CDKN2A-201ENST00000304494 OXER1Q8TDS5 423 aa29.83■■■□□ 2.37
CDKN2A-201ENST00000304494 GJA10Q969M2 543 aa29.83■■■□□ 2.37
CDKN2A-201ENST00000304494 TOP1MTQ969P6 601 aa29.83■■■□□ 2.37
CDKN2A-201ENST00000304494 CELF4Q9BZC1 486 aaKnown RBP29.83■■■□□ 2.37
CDKN2A-201ENST00000304494 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.82■■■□□ 2.36
CDKN2A-201ENST00000304494 LCHNA4D1U4 455 aa29.82■■■□□ 2.36
CDKN2A-201ENST00000304494 TMEM62Q0P6H9 643 aa29.82■■■□□ 2.36
CDKN2A-201ENST00000304494 MIER3Q7Z3K6 550 aa29.82■■■□□ 2.36
CDKN2A-201ENST00000304494 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.82■■■□□ 2.36
CDKN2A-201ENST00000304494 ARNTL2Q8WYA1 636 aa29.82■■■□□ 2.36
CDKN2A-201ENST00000304494 CERS4Q9HA82 394 aa29.82■■■□□ 2.36
CDKN2A-201ENST00000304494 NRBP2Q9NSY0 501 aa29.82■■■□□ 2.36
CDKN2A-201ENST00000304494 SIP14410 1827 aa29.82■■■□□ 2.36
CDKN2A-201ENST00000304494 KDM3AQ9Y4C1 1321 aa29.81■■■□□ 2.36
CDKN2A-201ENST00000304494 RBAK-RBAKDNI3L0D1 243 aa29.81■■■□□ 2.36
CDKN2A-201ENST00000304494 ARHGEF15O94989 841 aa29.81■■■□□ 2.36
CDKN2A-201ENST00000304494 TRMT1LQ7Z2T5 733 aaKnown RBP29.81■■■□□ 2.36
CDKN2A-201ENST00000304494 FAM20AQ96MK3 541 aa29.81■■■□□ 2.36
CDKN2A-201ENST00000304494 SLC37A4O43826 429 aa29.8■■■□□ 2.36
CDKN2A-201ENST00000304494 CCNT1O60563 726 aaKnown RBP29.8■■■□□ 2.36
CDKN2A-201ENST00000304494 JAK2O60674 1132 aa29.8■■■□□ 2.36
CDKN2A-201ENST00000304494 C22orf31O95567 290 aa29.8■■■□□ 2.36
CDKN2A-201ENST00000304494 OATP04181 439 aa29.8■■■□□ 2.36
CDKN2A-201ENST00000304494 HTRA4P83105 476 aaPredicted RBP29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms