RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 SAMM50Q9Y512 469 aa10.63□□□□□ -0.71
RFX3-201ENST00000302303 NOP56O00567 594 aaKnown RBP10.63□□□□□ -0.71
RFX3-201ENST00000302303 POLR2DO15514 142 aaKnown RBP10.63□□□□□ -0.71
RFX3-201ENST00000302303 SLC26A4O43511 780 aa10.63□□□□□ -0.71
RFX3-201ENST00000302303 ASGR1P07306 291 aa10.63□□□□□ -0.71
RFX3-201ENST00000302303 GJB1P08034 283 aa10.63□□□□□ -0.71
RFX3-201ENST00000302303 CPT1AP50416 773 aa10.63□□□□□ -0.71
RFX3-201ENST00000302303 MDM2Q00987 491 aaPredicted RBP10.63□□□□□ -0.71
RFX3-201ENST00000302303 PLCB4Q15147 1175 aa10.63□□□□□ -0.71
RFX3-201ENST00000302303 TARBP2Q15633 366 aaKnown RBP10.63□□□□□ -0.71
RFX3-201ENST00000302303 DGKDQ16760 1214 aa10.63□□□□□ -0.71
RFX3-201ENST00000302303 CSPP1Q1MSJ5 1256 aa10.63□□□□□ -0.71
RFX3-201ENST00000302303 COL13A1Q5TAT6 717 aaPredicted RBP10.63□□□□□ -0.71
RFX3-201ENST00000302303 SH3RF1Q7Z6J0 888 aa10.63□□□□□ -0.71
RFX3-201ENST00000302303 PDILTQ8N807 584 aa10.63□□□□□ -0.71
RFX3-201ENST00000302303 PPP1R13LQ8WUF5 828 aa10.63□□□□□ -0.71
RFX3-201ENST00000302303 SH2D3AQ9BRG2 576 aa10.63□□□□□ -0.71
RFX3-201ENST00000302303 ZSWIM4Q9H7M6 989 aa10.63□□□□□ -0.71
RFX3-201ENST00000302303 DDX19AQ9NUU7 478 aaKnown RBP10.63□□□□□ -0.71
RFX3-201ENST00000302303 H3BRB1 525 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 ZNF202O95125 648 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 SGPL1O95470 568 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 XRCC6P12956 609 aaKnown RBP eCLIP10.62□□□□□ -0.71
RFX3-201ENST00000302303 HOXC8P31273 242 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 GJA8P48165 433 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 SLC12A3P55017 1021 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 NPEPPSP55786 919 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 ADAM17P78536 824 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 PRKCEQ02156 737 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 ARSHQ5FYA8 562 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 CXCL17Q6UXB2 119 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 NIFKQ9BYG3 293 aaKnown RBP10.62□□□□□ -0.71
RFX3-201ENST00000302303 SMARCAD1Q9H4L7 1026 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 TUT1Q9H6E5 874 aaKnown RBP10.62□□□□□ -0.71
RFX3-201ENST00000302303 PDLIM7Q9NR12 457 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 SERTAD1Q9UHV2 236 aa10.62□□□□□ -0.71
RFX3-201ENST00000302303 BACH1O14867 736 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 MARK3P27448 753 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 YWHABP31946 246 aaKnown RBP10.61□□□□□ -0.71
RFX3-201ENST00000302303 SYKP43405 635 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 RARRES1P49788 294 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 ACLYP53396 1101 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 FAM160A1Q05DH4 1040 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 XKR3Q5GH77 459 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 MARCH8Q5T0T0 291 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 HAUS3Q68CZ6 603 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 PLA2G4FQ68DD2 849 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 KCTD17Q8N5Z5 321 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 SYT2Q8N9I0 419 aaPredicted RBP10.61□□□□□ -0.71
RFX3-201ENST00000302303 ERMNQ8TAM6 284 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 ATP8B4Q8TF62 1192 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 U2AF1L4Q8WU68 220 aaKnown RBP10.61□□□□□ -0.71
RFX3-201ENST00000302303 RAD54LQ92698 747 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 DHX58Q96C10 678 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 CTAGE1Q96RT6 745 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 TSEN34Q9BSV6 310 aaKnown RBP10.61□□□□□ -0.71
RFX3-201ENST00000302303 KBTBD4Q9NVX7 518 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 DACT1Q9NYF0 836 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 FAM13BQ9NYF5 915 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 STK24Q9Y6E0 443 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 SCN10AQ9Y5Y9 1956 aa10.61□□□□□ -0.71
RFX3-201ENST00000302303 KDM3AQ9Y4C1 1321 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 KPNA6O60684 536 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 EYA4O95677 639 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 OATP04181 439 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 MYL3P08590 195 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 SLFN14P0C7P3 912 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 COL6A1P12109 1028 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 CASP1P29466 404 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 PSEN2P49810 448 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 SLC26A2P50443 739 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 MCM6Q14566 821 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 ZRSR1Q15695 479 aaKnown RBP10.6□□□□□ -0.71
RFX3-201ENST00000302303 RRAGBQ5VZM2 374 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 FAM160B1Q5W0V3 765 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 KRBA2Q6ZNG9 492 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 C1orf186Q6ZWK4 172 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 TRMT1LQ7Z2T5 733 aaKnown RBP10.6□□□□□ -0.71
RFX3-201ENST00000302303 RNF180Q86T96 592 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 GRAMD1CQ8IYS0 662 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 SLC43A3Q8NBI5 491 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 STAMQ92783 540 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 GLG1Q92896 1179 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 ATP6V0A1Q93050 837 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 ZBTB10Q96DT7 871 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 CALML4Q96GE6 196 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 NACC1Q96RE7 527 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 MTG1Q9BT17 334 aaPredicted RBP10.6□□□□□ -0.71
RFX3-201ENST00000302303 NT5C3AQ9H0P0 336 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 ANKEF1Q9NU02 776 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 ERAP1Q9NZ08 941 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 DBR1Q9UK59 544 aaKnown RBP10.6□□□□□ -0.71
RFX3-201ENST00000302303 PHF24Q9UPV7 400 aa10.6□□□□□ -0.71
RFX3-201ENST00000302303 GOLGA6L4A6NEF3 574 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 MYMKA6NI61 221 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 DDX11L8A8MPP1 907 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 RBAK-RBAKDNI3L0D1 243 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 DNM1LO00429 736 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 PLA2G4BP0C869 781 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 INSRRP14616 1297 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms