RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 CPSF3Q9UKF6 684 aaKnown RBP12.1□□□□□ -0.47
GCN1-201ENST00000300648 SYDE1Q6ZW31 735 aaPredicted RBP12.1□□□□□ -0.47
GCN1-201ENST00000300648 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
GCN1-201ENST00000300648 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 KDM1AO60341 852 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 TRIM62Q9BVG3 475 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 SLC38A10Q9HBR0 1119 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 ABCF3Q9NUQ8 709 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 E2F6O75461 281 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 MTA3Q9BTC8 594 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 BEGAINQ9BUH8 593 aa12.1□□□□□ -0.47
GCN1-201ENST00000300648 PIK3R2O00459 728 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 MYBL1P10243 752 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 HSPD1P10809 573 aaKnown RBP12.09□□□□□ -0.47
GCN1-201ENST00000300648 CYP4F22Q6NT55 531 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 IFNL3Q8IZI9 196 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 EML4Q9HC35 981 aaKnown RBP12.09□□□□□ -0.47
GCN1-201ENST00000300648 TNKSO95271 1327 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 CTSWP56202 376 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 CCNA1P78396 465 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 TMPRSS15P98073 1019 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 CHRNA2Q15822 529 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 NEUROG2Q9H2A3 272 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 CDC42BPBQ9Y5S2 1711 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 DISP1Q96F81 1524 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 WDR19Q8NEZ3 1342 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 ATICP31939 592 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 CHRNA3P32297 505 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 OTUD7BQ6GQQ9 843 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 ANKRD27Q96NW4 1050 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 KIAA1586Q9HCI6 787 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 RCOR1Q9UKL0 485 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 CSADQ9Y600 493 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 ZBED1O96006 694 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 HSPA13P48723 471 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 TRPC1P48995 793 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 LCA5Q86VQ0 697 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 FBXO11Q86XK2 927 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 PPP1R2P1Q96PQ5 205 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 TSPOAP1O95153 1857 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 RFX7Q2KHR2 1363 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 RASA4BC9J798 803 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 RASA4O43374 803 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 SAT1P21673 171 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 BASP1P80723 227 aaKnown RBP12.09□□□□□ -0.47
GCN1-201ENST00000300648 PARVGQ9HBI0 331 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 PER1O15534 1290 aaPredicted RBP12.09□□□□□ -0.47
GCN1-201ENST00000300648 CTDSPL2Q05D32 466 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 FBXO38Q6PIJ6 1188 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 OSBPL9Q96SU4 736 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 PLAAQ9Y263 795 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 ABCA8O94911 1581 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 DAB1O75553 588 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 S100A5P33763 92 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 METTL13Q8N6R0 699 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 MAML3Q96JK9 1138 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 C8orf37Q96NL8 207 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 FOXP3Q9BZS1 431 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 KDM4CQ9H3R0 1056 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 SLC39A2Q9NP94 309 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 IQGAP3Q86VI3 1631 aa12.09□□□□□ -0.47
GCN1-201ENST00000300648 TIMM10P62072 90 aa12.08□□□□□ -0.47
GCN1-201ENST00000300648 DHX34Q14147 1143 aaKnown RBP12.08□□□□□ -0.47
GCN1-201ENST00000300648 CEP55Q53EZ4 464 aa12.08□□□□□ -0.47
GCN1-201ENST00000300648 PGBD1Q96JS3 809 aa12.08□□□□□ -0.47
GCN1-201ENST00000300648 CEP72Q9P209 647 aa12.08□□□□□ -0.47
GCN1-201ENST00000300648 ITGB1BP2Q9UKP3 347 aa12.08□□□□□ -0.47
GCN1-201ENST00000300648 LEMD3Q9Y2U8 911 aa12.08□□□□□ -0.47
GCN1-201ENST00000300648 CACNA1FO60840 1977 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 ZBBXA8MT70 800 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 DDX39AO00148 427 aaKnown RBP12.08□□□□□ -0.48
GCN1-201ENST00000300648 CTIFO43310 598 aaKnown RBP12.08□□□□□ -0.48
GCN1-201ENST00000300648 MFAP3LO75121 409 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 IL10P22301 178 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 CCNE1P24864 410 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 PDIA3P30101 505 aaKnown RBP12.08□□□□□ -0.48
GCN1-201ENST00000300648 AARSP49588 968 aaKnown RBP eCLIP12.08□□□□□ -0.488e-6■■■■■ 52.4
GCN1-201ENST00000300648 COPS2P61201 443 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 CUL4AQ13619 759 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 METTL23Q86XA0 190 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 PKD2L2Q9NZM6 624 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 ADD3Q9UEY8 706 aaKnown RBP12.08□□□□□ -0.48
GCN1-201ENST00000300648 PCDHA5Q9Y5H7 936 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 PYGMP11217 842 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 TBC1D9BQ66K14 1250 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 BTBD6Q96KE9 485 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 C3orf20Q8ND61 904 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 LZICQ8WZA0 190 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 ALKBH8Q96BT7 664 aaKnown RBP12.08□□□□□ -0.48
GCN1-201ENST00000300648 SNX25Q9H3E2 840 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 KIAA1024Q9UPX6 916 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 NEURL1BA8MQ27 555 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 HNRNPCP07910 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
GCN1-201ENST00000300648 TAP1Q03518 808 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 ZBTB38Q8NAP3 1195 aaPredicted RBP12.08□□□□□ -0.48
GCN1-201ENST00000300648 DACH2Q96NX9 599 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 MLXIPQ9HAP2 919 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 NOVA2Q9UNW9 492 aaKnown RBP12.08□□□□□ -0.48
GCN1-201ENST00000300648 SMG5Q9UPR3 1016 aaKnown RBP12.08□□□□□ -0.48
GCN1-201ENST00000300648 SRPRBQ9Y5M8 271 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms