RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 KATNBL1Q9H079 304 aa7.38□□□□□ -1.23
DEPDC4-201ENST00000299185 LIMD1Q9UGP4 676 aa7.38□□□□□ -1.23
DEPDC4-201ENST00000299185 SRRDQ9UH36 339 aa7.38□□□□□ -1.23
DEPDC4-201ENST00000299185 DOCK5Q9H7D0 1870 aa7.38□□□□□ -1.23
DEPDC4-201ENST00000299185 ZNFX1Q9P2E3 1918 aaKnown RBP7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 PP2D1A8MPX8 630 aa7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 PDCP20941 246 aa7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 EDNRBP24530 442 aa7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 U2AF2P26368 475 aaKnown RBP eCLIP7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 CCND3P30281 292 aaPredicted RBP7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 ADCYAP1R1P41586 468 aa7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 KIF22Q14807 665 aa7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 PRR16Q569H4 304 aa7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 HABP4Q5JVS0 413 aaKnown RBP7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 NEK8Q86SG6 692 aa7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 PLA2G4DQ86XP0 818 aa7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 IL27Q8NEV9 243 aa7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 BICD2Q8TD16 824 aa7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 SOCS4Q8WXH5 440 aa7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 ARHGAP9Q9BRR9 750 aa7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 FOXP1Q9H334 677 aaPredicted RBP7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 CUEDC1Q9NWM3 386 aaPredicted RBP7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 CHMP5Q9NZZ3 219 aa7.37□□□□□ -1.23
DEPDC4-201ENST00000299185 IGLV3-22A0A075B6J6 115 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 MYADML2A6NDP7 307 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 CHMP2AO43633 222 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 ADCY3O60266 1144 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 CCNT1O60563 726 aaKnown RBP7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 LILRB3O75022 631 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 INHAP05111 366 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 UBA1P22314 1058 aaKnown RBP7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 MARCKSP29966 332 aaPredicted RBP7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 CCND2P30279 289 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 ZNF76P36508 570 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 ITGB3BPQ13352 177 aaPredicted RBP7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 SF3A1Q15459 793 aaKnown RBP7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 IL17AQ16552 155 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 OLFML2BQ68BL8 750 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 LYSMD3Q7Z3D4 306 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 ABRAQ8N0Z2 381 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 Q8N3U1 123 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 RGS22Q8NE09 1264 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 RAET1EQ8TD07 263 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 NSUN6Q8TEA1 469 aaKnown RBP7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 DDX25Q9UHL0 483 aaKnown RBP7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 PNMA2Q9UL42 364 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 NOL7Q9UMY1 257 aaKnown RBP7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 UBIAD1Q9Y5Z9 338 aa7.36□□□□□ -1.23
DEPDC4-201ENST00000299185 A0A087WWV3 80 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 MSH4O15457 936 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 NEMFO60524 1076 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 ATP9AO75110 1047 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 CCNE2O96020 404 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 IGHA2P01877 340 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 HOXC6P09630 235 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 ZNF865P0CJ78 1059 aaPredicted RBP7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 CYBAP13498 195 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 SP2Q02086 613 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 TRAF1Q13077 416 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 PTPAQ15257 358 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 MTFR1Q15390 333 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 LY6KQ17RY6 165 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 SPECC1Q5M775 1068 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 PCNX4Q63HM2 1172 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 GALNT17Q6IS24 598 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 BRAPQ7Z569 592 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 ALYREFQ86V81 257 aaKnown RBP7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 TRIM50Q86XT4 487 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 ETNPPLQ8TBG4 499 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 HAS1Q92839 578 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 MBOAT7Q96N66 472 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 CLIC6Q96NY7 704 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 INPP4AQ96PE3 977 aaPredicted RBP7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 PSMG3-AS1Q96PY0 264 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 MXRA8Q9BRK3 442 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 TINF2Q9BSI4 451 aa7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 AGO4Q9HCK5 861 aaKnown RBP7.35□□□□□ -1.23
DEPDC4-201ENST00000299185 FRMPD3Q5JV73 1810 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 EML1O00423 815 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 BAG4O95429 457 aaKnown RBP7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 FOSP01100 380 aaPredicted RBP7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 CYP3A4P08684 503 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 OR52Z1P0C646 297 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 KCNA2P16389 499 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 CIITAP33076 1130 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 SOX10P56693 466 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 NUCB2P80303 420 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 CACNB2Q08289 660 aaPredicted RBP7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 STK38Q15208 465 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 CALCRLQ16602 461 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 CEP55Q53EZ4 464 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 INTS6LQ5JSJ4 861 aaKnown RBP7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 TAPT1Q6NXT6 567 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 MAMDC4Q6UXC1 1216 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 USP49Q70CQ1 688 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 CTU1Q7Z7A3 348 aaKnown RBP7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 ZBTB33Q86T24 672 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 VSIG10LQ86VR7 867 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 C4orf32Q8N8J7 132 aa7.34□□□□□ -1.23
DEPDC4-201ENST00000299185 MORC4Q8TE76 937 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms