RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 EXOC1LA0A1B0GW35 172 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 RPN1P04843 607 aaKnown RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 HLA-DOAP06340 250 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 USH1GQ495M9 461 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 ANO1Q5XXA6 986 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 POTEEQ6S8J3 1075 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 CCDC103Q8IW40 242 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 FAM9CQ8IZT9 166 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 FHDC1Q9C0D6 1143 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 TRPC6Q9Y210 931 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 SMIM31A0A1B0GVY4 71 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 HIC1Q14526 733 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 SPATA21Q7Z572 469 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 PARD3BQ8TEW8 1205 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 GCOM2Q9BZD3 368 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 KLC2Q9H0B6 622 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 PARP1P09874 1014 aaKnown RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 ADCY8P40145 1251 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 GUCY2DQ02846 1103 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 FRMD8Q9BZ67 464 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 UBN1Q9NPG3 1134 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 RAD54L2Q9Y4B4 1467 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 AKAP11Q9UKA4 1901 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 ZBTB39O15060 712 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 FOSL1P15407 271 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 KRT20P35900 424 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 RXRGP48443 463 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 KARSQ15046 597 aaKnown RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 SF3B3Q15393 1217 aaKnown RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 KBTBD12Q3ZCT8 623 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 CCDC157Q569K6 752 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 TMCO4Q5TGY1 634 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 RHOT2Q8IXI1 618 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 LPIN2Q92539 896 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 CDCA5Q96FF9 252 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 SAP30BPQ9UHR5 308 aaKnown RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 AP1G2O75843 785 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 CCDC166P0CW27 439 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 MSH2P43246 934 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 SPANXN2Q5MJ10 180 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 AFG3L2Q9Y4W6 797 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 GNAT3A8MTJ3 354 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 SPAG6O75602 509 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 C16orf89Q6UX73 402 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 SLITRK6Q9H5Y7 841 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 MRPL47Q9HD33 250 aaKnown RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 LMBRD1Q9NUN5 540 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 LZTS1Q9Y250 596 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 PFASO15067 1338 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 KPNA7A9QM74 516 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 MARK3P27448 753 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 DEPDC1Q5TB30 811 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 TSPYL6Q8N831 410 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 JADE3Q92613 823 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 ASCC2Q9H1I8 757 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 SLC13A4Q9UKG4 626 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 DSEQ9UL01 958 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 TNFAIP8O95379 198 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 DLG4P78352 724 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 LRMPQ12912 555 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 KLHL38Q2WGJ6 581 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 MICU3Q86XE3 530 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 ANKRD44Q8N8A2 993 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 DHTKD1Q96HY7 919 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 DYDC2Q96IM9 177 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 WWP1Q9H0M0 922 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 EML4Q9HC35 981 aaKnown RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 A1CFQ9NQ94 594 aaKnown RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 PCF11O94913 1555 aaKnown RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 MROH2BQ7Z745 1585 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 H2AFYO75367 372 aaKnown RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 KLHL2O95198 593 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 HMOX2P30519 316 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 GNL1P36915 607 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 PMS2P54278 862 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 C2CD5Q86YS7 1000 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 PCYOX1LQ8NBM8 494 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 STKLD1Q8NE28 680 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 BLOC1S5Q8TDH9 187 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 DHX58Q96C10 678 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 ZNF274Q96GC6 653 aaPredicted RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 ZFYVE1Q9HBF4 777 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 ANGEL1Q9UNK9 670 aaKnown RBP5.18□□□□□ -1.58
CSMD3-201ENST00000297405 TALDO1P37837 337 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 STK4Q13043 487 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 SHCBP1Q8NEM2 672 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 VPS39Q96JC1 886 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 ATP6V1G3Q96LB4 118 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 ZBTB18Q99592 522 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 KIF17Q9P2E2 1029 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 ZFP69BQ9UJL9 534 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 PRELID1Q9Y255 219 aa5.18□□□□□ -1.58
CSMD3-201ENST00000297405 O00370 1275 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 CDH16O75309 829 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 BCAR3O75815 825 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 TRIM49P0CI25 452 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 TRIM49CP0CI26 452 aa5.17□□□□□ -1.58
CSMD3-201ENST00000297405 AARSP49588 968 aaKnown RBP eCLIP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms