RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ANKRD23Q86SG2 305 aa17.23■□□□□ 0.35
LSM6-201ENST00000296581 CCDC150Q8NCX0 1101 aa17.23■□□□□ 0.35
LSM6-201ENST00000296581 BRI3BPQ8WY22 251 aa17.23■□□□□ 0.35
LSM6-201ENST00000296581 BTBD19C9JJ37 291 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 TBCAO75347 108 aaKnown RBP17.22■□□□□ 0.35
LSM6-201ENST00000296581 ZBTB48P10074 688 aaPredicted RBP17.22■□□□□ 0.35
LSM6-201ENST00000296581 PSMC5P62195 406 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 TBX2Q13207 712 aaPredicted RBP17.22■□□□□ 0.35
LSM6-201ENST00000296581 SPRYD7Q5W111 196 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 SPECC1LQ69YQ0 1117 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 SFR1Q86XK3 245 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 C4orf19Q8IY42 314 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 TBC1D7Q9P0N9 293 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 CGNQ9P2M7 1197 aaKnown RBP17.22■□□□□ 0.35
LSM6-201ENST00000296581 COL4A3BPQ9Y5P4 624 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 DNAJC25-GNG10A0A024R161 153 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 RSPH10B2B2RC85 870 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 PDHXO00330 501 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 TEX33O43247 280 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 ITGBL1O95965 494 aaPredicted RBP17.22■□□□□ 0.35
LSM6-201ENST00000296581 RSPH10BP0C881 870 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 CYP2C8P10632 490 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 GUCY2CP25092 1073 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 FSTL1Q12841 308 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 EPM2AIP1Q7L775 607 aaPredicted RBP17.22■□□□□ 0.35
LSM6-201ENST00000296581 FAM114A1Q8IWE2 563 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 SCFD1Q8WVM8 642 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 ZHX3Q9H4I2 956 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 OLFML3Q9NRN5 406 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 ODF2LQ9ULJ1 636 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 PYCARDQ9ULZ3 195 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 PCDHA10Q9Y5I2 948 aa17.22■□□□□ 0.35
LSM6-201ENST00000296581 ZNFX1Q9P2E3 1918 aaKnown RBP17.22■□□□□ 0.35
LSM6-201ENST00000296581 ARHGEF35A5YM69 484 aa17.21■□□□□ 0.35
LSM6-201ENST00000296581 ZNF131P52739 623 aa17.21■□□□□ 0.35
LSM6-201ENST00000296581 UGCGQ16739 394 aa17.21■□□□□ 0.35
LSM6-201ENST00000296581 CST9Q5W186 159 aa17.21■□□□□ 0.35
LSM6-201ENST00000296581 ARMCX5Q6P1M9 558 aa17.21■□□□□ 0.35
LSM6-201ENST00000296581 KIAA1524Q8TCG1 905 aa17.21■□□□□ 0.35
LSM6-201ENST00000296581 FGD4Q96M96 766 aa17.21■□□□□ 0.35
LSM6-201ENST00000296581 TSG101Q99816 390 aa17.21■□□□□ 0.35
LSM6-201ENST00000296581 JPH1Q9HDC5 661 aaPredicted RBP17.21■□□□□ 0.35
LSM6-201ENST00000296581 TAB2Q9NYJ8 693 aa17.21■□□□□ 0.35
LSM6-201ENST00000296581 MAGEC2Q9UBF1 373 aaPredicted RBP17.21■□□□□ 0.35
LSM6-201ENST00000296581 MMP19Q99542 508 aa17.21■□□□□ 0.34
LSM6-201ENST00000296581 MYH11P35749 1972 aa17.2■□□□□ 0.34
LSM6-201ENST00000296581 B4DLN1 442 aa17.2■□□□□ 0.34
LSM6-201ENST00000296581 N4BP3O15049 544 aa17.2■□□□□ 0.34
LSM6-201ENST00000296581 FGFR1OPO95684 399 aaKnown RBP17.2■□□□□ 0.34
LSM6-201ENST00000296581 RARRES1P49788 294 aa17.2■□□□□ 0.34
LSM6-201ENST00000296581 KCTD2Q14681 263 aa17.2■□□□□ 0.34
LSM6-201ENST00000296581 PTPN21Q16825 1174 aa17.2■□□□□ 0.34
LSM6-201ENST00000296581 BMT2Q1RMZ1 405 aa17.2■□□□□ 0.34
LSM6-201ENST00000296581 LRRC55Q6ZSA7 311 aa17.2■□□□□ 0.34
LSM6-201ENST00000296581 KCTD10Q9H3F6 313 aa17.2■□□□□ 0.34
LSM6-201ENST00000296581 SEL1LQ9UBV2 794 aa17.2■□□□□ 0.34
LSM6-201ENST00000296581 SLC9A2Q9UBY0 812 aa17.2■□□□□ 0.34
LSM6-201ENST00000296581 FAM13AO94988 1023 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 YWHABP31946 246 aaKnown RBP17.19■□□□□ 0.34
LSM6-201ENST00000296581 CASP5P51878 434 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 CCZ1BP86790 482 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 CCZ1P86791 482 aaPredicted RBP17.19■□□□□ 0.34
LSM6-201ENST00000296581 MKRN3Q13064 507 aaKnown RBP17.19■□□□□ 0.34
LSM6-201ENST00000296581 DNTTIP2Q5QJE6 756 aaKnown RBP17.19■□□□□ 0.34
LSM6-201ENST00000296581 CHADLQ6NUI6 762 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 PADI6Q6TGC4 694 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 GPRC5AQ8NFJ5 357 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 SMCR8Q8TEV9 937 aaPredicted RBP17.19■□□□□ 0.34
LSM6-201ENST00000296581 CNOT6LQ96LI5 555 aaKnown RBP17.19■□□□□ 0.34
LSM6-201ENST00000296581 VPS16Q9H269 839 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 BCAS3Q9H6U6 928 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 ANKEF1Q9NU02 776 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 ITIH6Q6UXX5 1313 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 SFPQP23246 707 aaKnown RBP eCLIP17.19■□□□□ 0.34
LSM6-201ENST00000296581 SP2Q02086 613 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 MAPK7Q13164 816 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 MPHOSPH6Q99547 160 aaKnown RBP17.19■□□□□ 0.34
LSM6-201ENST00000296581 PARVGQ9HBI0 331 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 MORF4L1Q9UBU8 362 aa17.19■□□□□ 0.34
LSM6-201ENST00000296581 LOC102724159A0A0B4J2E5 919 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 SOCS7O14512 581 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 PGK2P07205 417 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 PSAPP07602 524 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 GCLCP48506 637 aaPredicted RBP17.18■□□□□ 0.34
LSM6-201ENST00000296581 ACTR2P61160 394 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 PWP2Q15269 919 aaKnown RBP17.18■□□□□ 0.34
LSM6-201ENST00000296581 PPP4R3CPQ6ZMV5 832 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 ZC3H3Q8IXZ2 948 aaKnown RBP17.18■□□□□ 0.34
LSM6-201ENST00000296581 ZNF507Q8TCN5 953 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 PORCNQ9H237 461 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 LGALS16A8MUM7 142 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 DKC1O60832 514 aaKnown RBP eCLIP17.18■□□□□ 0.34
LSM6-201ENST00000296581 CCNA1P78396 465 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 FKBP3Q00688 224 aaKnown RBP17.18■□□□□ 0.34
LSM6-201ENST00000296581 ABHD15Q6UXT9 468 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 SEPT14Q6ZU15 432 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 MORC4Q8TE76 937 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 FIZ1Q96SL8 496 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 TUBGCP2Q9BSJ2 902 aa17.18■□□□□ 0.34
LSM6-201ENST00000296581 MRPL44Q9H9J2 332 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms