RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 EHD4Q9H223 541 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 DMGDHQ9UI17 866 aaKnown RBP14.54□□□□□ -0.08
HPS3-201ENST00000296051 KDM4FA0A1W2PPD8 638 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 ANO9A1A5B4 782 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 THAP12O43422 761 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 PLEKP08567 350 aaPredicted RBP14.54□□□□□ -0.08
HPS3-201ENST00000296051 P4HA1P13674 534 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 CORO7P57737 925 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 SNX16P57768 344 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 RNF207Q6ZRF8 634 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 SLC16A10Q8TF71 515 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 STAG1Q8WVM7 1258 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 CDHR1Q96JP9 859 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 ISCA1Q9BUE6 129 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 LIMA1Q9UHB6 759 aaKnown RBP14.54□□□□□ -0.08
HPS3-201ENST00000296051 SNX12Q9UMY4 172 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 NRKQ7Z2Y5 1582 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 HUNKP57058 714 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 TAF1CQ15572 869 aaPredicted RBP14.54□□□□□ -0.08
HPS3-201ENST00000296051 UBE2SQ16763 222 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 SNRNP48Q6IEG0 339 aaKnown RBP14.54□□□□□ -0.08
HPS3-201ENST00000296051 WHAMMQ8TF30 809 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 POMGNT1Q8WZA1 660 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 LACRTQ9GZZ8 138 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 ELP3Q9H9T3 547 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 RABGAP1Q9Y3P9 1069 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 HMGB1P1B2RPK0 211 aaPredicted RBP14.54□□□□□ -0.08
HPS3-201ENST00000296051 POC1B-GALNT4F8VUJ3 575 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 TNPO2O14787 897 aaKnown RBP14.54□□□□□ -0.08
HPS3-201ENST00000296051 ARPP19P56211 112 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 MYO1EQ12965 1108 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 ZNF211Q13398 564 aaPredicted RBP14.54□□□□□ -0.08
HPS3-201ENST00000296051 MKRN4PQ13434 485 aaPredicted RBP14.54□□□□□ -0.08
HPS3-201ENST00000296051 CCDC13Q8IYE1 715 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 PPM1KQ8N3J5 372 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 TBC1D16Q8TBP0 767 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 NCAPGQ9BPX3 1015 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 ABCA9Q8IUA7 1624 aa14.54□□□□□ -0.08
HPS3-201ENST00000296051 PPRC1Q5VV67 1664 aaKnown RBP14.54□□□□□ -0.08
HPS3-201ENST00000296051 TCHHQ07283 1943 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 TSNAXIP1Q2TAA8 658 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 MUM1Q2TAK8 710 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 NUGGCQ68CJ6 796 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 DDX42Q86XP3 938 aaKnown RBP eCLIP14.53□□□□□ -0.08
HPS3-201ENST00000296051 HACL1Q9UJ83 578 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 SFI1A8K8P3 1242 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 ZBBXA8MT70 800 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 NDC80O14777 642 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 CAPN9O14815 690 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 ZRANB2O95218 330 aaKnown RBP eCLIP14.53□□□□□ -0.08
HPS3-201ENST00000296051 ACSL3O95573 720 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 TNNC2P02585 160 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 LIN9Q5TKA1 542 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 LBHD1Q9BQE6 289 aaPredicted RBP14.53□□□□□ -0.08
HPS3-201ENST00000296051 RBM12Q9NTZ6 932 aaKnown RBP14.53□□□□□ -0.08
HPS3-201ENST00000296051 SETBP1Q9Y6X0 1596 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 GNA14O95837 355 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 HOXD10P28358 340 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 HMGCS2P54868 508 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 RC3H1Q5TC82 1133 aaKnown RBP14.53□□□□□ -0.08
HPS3-201ENST00000296051 BARGINQ6ZT62 677 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 RSRC2Q7L4I2 434 aaKnown RBP14.53□□□□□ -0.08
HPS3-201ENST00000296051 NLRP7Q8WX94 980 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 FAM84BQ96KN1 310 aaPredicted RBP14.53□□□□□ -0.08
HPS3-201ENST00000296051 CEP63Q96MT8 703 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 PSD3Q9NYI0 1048 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 TPX2Q9ULW0 747 aaKnown RBP14.53□□□□□ -0.08
HPS3-201ENST00000296051 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.53□□□□□ -0.08
HPS3-201ENST00000296051 COL3A1P02461 1466 aaPredicted RBP14.53□□□□□ -0.08
HPS3-201ENST00000296051 H0Y3Z8 333 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 TXNDC9O14530 226 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 EIF3HO15372 352 aaKnown RBP eCLIP14.53□□□□□ -0.08
HPS3-201ENST00000296051 MEFVO15553 781 aaPredicted RBP14.53□□□□□ -0.08
HPS3-201ENST00000296051 PPP1R37O75864 691 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 DPYDQ12882 1025 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 PDIA6Q15084 440 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 ANGEL2Q5VTE6 544 aaKnown RBP14.53□□□□□ -0.08
HPS3-201ENST00000296051 GALNT17Q6IS24 598 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 DDX12PQ92771 950 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 ARL8AQ96BM9 186 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 CCT8L2Q96SF2 557 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 FAM167BQ9BTA0 163 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 GGA3Q9NZ52 723 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 AMACRQ9UHK6 382 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 CAPN11Q9UMQ6 739 aa14.53□□□□□ -0.08
HPS3-201ENST00000296051 STK36Q9NRP7 1315 aa14.52□□□□□ -0.08
HPS3-201ENST00000296051 GMNCA6NCL1 334 aa14.52□□□□□ -0.08
HPS3-201ENST00000296051 SUN1O94901 812 aa14.52□□□□□ -0.08
HPS3-201ENST00000296051 OSTNP61366 133 aa14.52□□□□□ -0.08
HPS3-201ENST00000296051 STK4Q13043 487 aa14.52□□□□□ -0.08
HPS3-201ENST00000296051 LRRC14Q15048 493 aa14.52□□□□□ -0.08
HPS3-201ENST00000296051 KCNV2Q8TDN2 545 aa14.52□□□□□ -0.08
HPS3-201ENST00000296051 GAS8O95995 478 aa14.52□□□□□ -0.09
HPS3-201ENST00000296051 SERPING1P05155 500 aa14.52□□□□□ -0.09
HPS3-201ENST00000296051 MMEP08473 750 aa14.52□□□□□ -0.09
HPS3-201ENST00000296051 TFDP1Q14186 410 aa14.52□□□□□ -0.09
HPS3-201ENST00000296051 RAET1EQ8TD07 263 aa14.52□□□□□ -0.09
HPS3-201ENST00000296051 KLC4Q9NSK0 619 aa14.52□□□□□ -0.09
HPS3-201ENST00000296051 EMILIN3Q9NT22 766 aa14.52□□□□□ -0.09
HPS3-201ENST00000296051 MYL3P08590 195 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms