RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 E2F4Q16254 413 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 DGKDQ16760 1214 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 HYIQ5T013 277 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 CKAP2LQ8IYA6 745 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 DEFB118Q96PH6 123 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 C16orf70Q9BSU1 422 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 UPF3AQ9H1J1 476 aaKnown RBP16.94■□□□□ 0.3
CCDC140-201ENST00000295226 AZI2Q9H6S1 392 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 ZSWIM4Q9H7M6 989 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 GRPEL1Q9HAV7 217 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 BLOC1S4Q9NUP1 217 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 MAFBQ9Y5Q3 323 aaPredicted RBP16.94■□□□□ 0.3
CCDC140-201ENST00000295226 STBD1O95210 358 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 CPT1AP50416 773 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 GRAMD1CQ8IYS0 662 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 SYAP1Q96A49 352 aaPredicted RBP16.94■□□□□ 0.3
CCDC140-201ENST00000295226 ZNF333Q96JL9 665 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 MCOLN1Q9GZU1 580 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 RNPEPQ9H4A4 650 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 SPC25Q9HBM1 224 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 DNAH12Q6ZR08 3092 aa16.93■□□□□ 0.3
CCDC140-201ENST00000295226 XRCC6P12956 609 aaKnown RBP eCLIP16.93■□□□□ 0.3
CCDC140-201ENST00000295226 PRKCEQ02156 737 aa16.93■□□□□ 0.3
CCDC140-201ENST00000295226 MCM6Q14566 821 aa16.93■□□□□ 0.3
CCDC140-201ENST00000295226 KCNA10Q16322 511 aa16.93■□□□□ 0.3
CCDC140-201ENST00000295226 FAM160B1Q5W0V3 765 aa16.93■□□□□ 0.3
CCDC140-201ENST00000295226 PLA2G4FQ68DD2 849 aa16.93■□□□□ 0.3
CCDC140-201ENST00000295226 NEK9Q8TD19 979 aa16.93■□□□□ 0.3
CCDC140-201ENST00000295226 ATP6V0A1Q93050 837 aa16.93■□□□□ 0.3
CCDC140-201ENST00000295226 PAK6Q9NQU5 681 aaPredicted RBP16.93■□□□□ 0.3
CCDC140-201ENST00000295226 STK24Q9Y6E0 443 aa16.93■□□□□ 0.3
CCDC140-201ENST00000295226 IGSF9BQ9UPX0 1349 aa16.93■□□□□ 0.3
CCDC140-201ENST00000295226 KDM3AQ9Y4C1 1321 aa16.93■□□□□ 0.3
CCDC140-201ENST00000295226 ACTN4O43707 911 aaKnown RBP16.92■□□□□ 0.3
CCDC140-201ENST00000295226 SSBP05455 408 aaKnown RBP eCLIP16.92■□□□□ 0.3
CCDC140-201ENST00000295226 HOXD8P13378 290 aaPredicted RBP16.92■□□□□ 0.3
CCDC140-201ENST00000295226 NPEPPSP55786 919 aa16.92■□□□□ 0.3
CCDC140-201ENST00000295226 LRRC41Q15345 812 aa16.92■□□□□ 0.3
CCDC140-201ENST00000295226 CXCL17Q6UXB2 119 aa16.92■□□□□ 0.3
CCDC140-201ENST00000295226 ANO5Q75V66 913 aa16.92■□□□□ 0.3
CCDC140-201ENST00000295226 C4orf19Q8IY42 314 aa16.92■□□□□ 0.3
CCDC140-201ENST00000295226 IQUBQ8NA54 791 aa16.92■□□□□ 0.3
CCDC140-201ENST00000295226 KLHDC9Q8NEP7 349 aa16.92■□□□□ 0.3
CCDC140-201ENST00000295226 AFAP1L1Q8TED9 768 aa16.92■□□□□ 0.3
CCDC140-201ENST00000295226 KAT2BQ92831 832 aa16.92■□□□□ 0.3
CCDC140-201ENST00000295226 ARMC5Q96C12 935 aa16.92■□□□□ 0.3
CCDC140-201ENST00000295226 NT5C3AQ9H0P0 336 aa16.92■□□□□ 0.3
CCDC140-201ENST00000295226 SMARCAD1Q9H4L7 1026 aa16.92■□□□□ 0.3
CCDC140-201ENST00000295226 DNM3Q9UQ16 869 aa16.92■□□□□ 0.3
CCDC140-201ENST00000295226 H3BRB1 525 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 MSCO60682 206 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 CASP1P29466 404 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 YWHABP31946 246 aaKnown RBP16.91■□□□□ 0.3
CCDC140-201ENST00000295226 AFMP43652 599 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 PLCB4Q15147 1175 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 CAMK4Q16566 473 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 BRDTQ58F21 947 aaPredicted RBP16.91■□□□□ 0.3
CCDC140-201ENST00000295226 PLPPR4Q7Z2D5 763 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 RAD54LQ92698 747 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 ERCC4Q92889 916 aaPredicted RBP16.91■□□□□ 0.3
CCDC140-201ENST00000295226 NACC1Q96RE7 527 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 MTRQ99707 1265 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 BHMT2Q9H2M3 363 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 TUT1Q9H6E5 874 aaKnown RBP16.91■□□□□ 0.3
CCDC140-201ENST00000295226 POLD4Q9HCU8 107 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 SEPT9Q9UHD8 586 aaPredicted RBP16.91■□□□□ 0.3
CCDC140-201ENST00000295226 EMSYQ7Z589 1322 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 PLA2G4BP0C869 781 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 PURAQ00577 322 aaKnown RBP16.91■□□□□ 0.3
CCDC140-201ENST00000295226 CCSAPQ6IQ19 270 aaPredicted RBP16.91■□□□□ 0.3
CCDC140-201ENST00000295226 KRBA2Q6ZNG9 492 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 CNNM3Q8NE01 707 aa16.91■□□□□ 0.3
CCDC140-201ENST00000295226 BMP2KQ9NSY1 1161 aaPredicted RBP16.91■□□□□ 0.3
CCDC140-201ENST00000295226 FRMPD3Q5JV73 1810 aa16.9■□□□□ 0.3
CCDC140-201ENST00000295226 KINO60870 393 aaKnown RBP16.9■□□□□ 0.3
CCDC140-201ENST00000295226 LYPLA2O95372 231 aa16.9■□□□□ 0.3
CCDC140-201ENST00000295226 OATP04181 439 aa16.9■□□□□ 0.3
CCDC140-201ENST00000295226 ASGR1P07306 291 aa16.9■□□□□ 0.3
CCDC140-201ENST00000295226 SLFN14P0C7P3 912 aa16.9■□□□□ 0.3
CCDC140-201ENST00000295226 NKX3-2P78367 333 aa16.9■□□□□ 0.3
CCDC140-201ENST00000295226 XKR9Q5GH70 373 aa16.9■□□□□ 0.3
CCDC140-201ENST00000295226 RNF180Q86T96 592 aa16.9■□□□□ 0.3
CCDC140-201ENST00000295226 CEP57L1Q8IYX8 460 aa16.9■□□□□ 0.3
CCDC140-201ENST00000295226 PIAS4Q8N2W9 510 aaPredicted RBP16.9■□□□□ 0.3
CCDC140-201ENST00000295226 TRAPPC12Q8WVT3 735 aa16.9■□□□□ 0.3
CCDC140-201ENST00000295226 LARP4BQ92615 738 aaKnown RBP16.9■□□□□ 0.3
CCDC140-201ENST00000295226 ZBTB10Q96DT7 871 aa16.9■□□□□ 0.3
CCDC140-201ENST00000295226 ERAP1Q9NZ08 941 aa16.9■□□□□ 0.3
CCDC140-201ENST00000295226 NPHP3-ACAD11A0A0J9YXS1 232 aa16.89■□□□□ 0.29
CCDC140-201ENST00000295226 SLC26A4O43511 780 aa16.89■□□□□ 0.29
CCDC140-201ENST00000295226 EYA4O95677 639 aa16.89■□□□□ 0.29
CCDC140-201ENST00000295226 PRR29P0C7W0 189 aa16.89■□□□□ 0.29
CCDC140-201ENST00000295226 KIAA0753Q2KHM9 967 aa16.89■□□□□ 0.29
CCDC140-201ENST00000295226 MTERF2Q49AM1 385 aa16.89■□□□□ 0.29
CCDC140-201ENST00000295226 XKR3Q5GH77 459 aa16.89■□□□□ 0.29
CCDC140-201ENST00000295226 CAVIN1Q6NZI2 390 aaKnown RBP16.89■□□□□ 0.29
CCDC140-201ENST00000295226 PAGE5Q96GU1 130 aa16.89■□□□□ 0.29
CCDC140-201ENST00000295226 STK17AQ9UEE5 414 aa16.89■□□□□ 0.29
CCDC140-201ENST00000295226 TRPC6Q9Y210 931 aa16.89■□□□□ 0.29
CCDC140-201ENST00000295226 F2P00734 622 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms