RNA–Protein interactions for RNA: ENST00000295055.12

CAPN13-201, Transcript of calpain 13, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN13, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-201ENST00000295055 AARSP49588 968 aaKnown RBP eCLIP13.2□□□□□ -0.3
CAPN13-201ENST00000295055 ITIH3Q06033 890 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 MIGA2Q7L4E1 593 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 SREK1Q8WXA9 508 aaKnown RBP13.2□□□□□ -0.3
CAPN13-201ENST00000295055 CEP95Q96GE4 821 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 OSBPL1AQ9BXW6 950 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 NOD2Q9HC29 1040 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 METTL14Q9HCE5 456 aaKnown RBP13.2□□□□□ -0.3
CAPN13-201ENST00000295055 TMCO1Q9UM00 188 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 MLH1P40692 756 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 RCAN1P53805 252 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 CYP4A11Q02928 519 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 CEBPZQ03701 1054 aaKnown RBP13.2□□□□□ -0.3
CAPN13-201ENST00000295055 KCNA1Q09470 495 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 RRP1BQ14684 758 aaKnown RBP13.2□□□□□ -0.3
CAPN13-201ENST00000295055 SLMAPQ14BN4 828 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 ZNF662Q6ZS27 426 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 ZNF654Q8IZM8 581 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 ZNF713Q8N859 430 aaPredicted RBP13.2□□□□□ -0.3
CAPN13-201ENST00000295055 NDNQ99608 321 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 MYL10Q9BUA6 226 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 MAK16Q9BXY0 300 aaKnown RBP13.2□□□□□ -0.3
CAPN13-201ENST00000295055 TNMDQ9H2S6 317 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 TAF1DQ9H5J8 278 aaPredicted RBP13.2□□□□□ -0.3
CAPN13-201ENST00000295055 RPAP3Q9H6T3 665 aaPredicted RBP13.2□□□□□ -0.3
CAPN13-201ENST00000295055 SYNCQ9H7C4 482 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 NCOA5Q9HCD5 579 aaKnown RBP13.2□□□□□ -0.3
CAPN13-201ENST00000295055 MTMR4Q9NYA4 1195 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 PPP2R3BQ9Y5P8 575 aa13.2□□□□□ -0.3
CAPN13-201ENST00000295055 BECN2A8MW95 431 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 TMCC1O94876 653 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 NFKBIAP25963 317 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 PSMC4P43686 418 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 GNGT1P63211 74 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 MXRA7P84157 204 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 ITGA7Q13683 1181 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 WHAMMP3Q1A5X7 153 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 RAB11FIP4Q86YS3 637 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 VPS37AQ8NEZ2 397 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 ZC3H15Q8WU90 426 aaKnown RBP13.19□□□□□ -0.3
CAPN13-201ENST00000295055 ZMAT5Q9UDW3 170 aaKnown RBP13.19□□□□□ -0.3
CAPN13-201ENST00000295055 WDR90Q96KV7 1748 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 MYH8P13535 1937 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 NPTXRO95502 500 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 RXRAP19793 462 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 METAP2P50579 478 aaKnown RBP eCLIP13.19□□□□□ -0.3
CAPN13-201ENST00000295055 POLE2P56282 527 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 IFFO1Q0D2I5 559 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 TROAPQ12815 778 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 GJC2Q5T442 439 aaPredicted RBP13.19□□□□□ -0.3
CAPN13-201ENST00000295055 NBPF12Q5TAG4 269 aaPredicted RBP13.19□□□□□ -0.3
CAPN13-201ENST00000295055 BPHLQ86WA6 291 aaPredicted RBP13.19□□□□□ -0.3
CAPN13-201ENST00000295055 ERICH1Q86X53 443 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 MICU3Q86XE3 530 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 DEPTORQ8TB45 409 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 RIN2Q8WYP3 895 aaPredicted RBP13.19□□□□□ -0.3
CAPN13-201ENST00000295055 TUBA8Q9NY65 449 aaPredicted RBP13.19□□□□□ -0.3
CAPN13-201ENST00000295055 HESX1Q9UBX0 185 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 STX8Q9UNK0 236 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 NID2Q14112 1375 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 SCN4AP35499 1836 aa13.19□□□□□ -0.3
CAPN13-201ENST00000295055 NDUFAB1O14561 156 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 CTDNEP1O95476 244 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 ATP6V1G2O95670 118 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 TUBP50607 506 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 MCCD1P59942 119 aaPredicted RBP13.18□□□□□ -0.3
CAPN13-201ENST00000295055 PPFIA1Q13136 1202 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 ABCB5Q2M3G0 1257 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 ATL3Q6DD88 541 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 DCPSQ96C86 337 aaKnown RBP13.18□□□□□ -0.3
CAPN13-201ENST00000295055 TMEM47Q9BQJ4 181 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 LLPHQ9BRT6 129 aaKnown RBP13.18□□□□□ -0.3
CAPN13-201ENST00000295055 LUC7LQ9NQ29 371 aaKnown RBP13.18□□□□□ -0.3
CAPN13-201ENST00000295055 FAM217BQ9NTX9 383 aaPredicted RBP13.18□□□□□ -0.3
CAPN13-201ENST00000295055 PFDN1O60925 122 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 CDC27P30260 824 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 CSE1LP55060 971 aaKnown RBP13.18□□□□□ -0.3
CAPN13-201ENST00000295055 JAG1P78504 1218 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 GSTM4Q03013 218 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 TMEM179Q6ZVK1 233 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 FANCBQ8NB91 859 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 MAELQ96JY0 434 aaKnown RBP13.18□□□□□ -0.3
CAPN13-201ENST00000295055 PAGR1Q9BTK6 254 aa13.18□□□□□ -0.3
CAPN13-201ENST00000295055 R3HDM2Q9Y2K5 976 aaKnown RBP13.18□□□□□ -0.3
CAPN13-201ENST00000295055 GOLGA8AA7E2F4 631 aa13.17□□□□□ -0.3
CAPN13-201ENST00000295055 PHF20L1A8MW92 1017 aa13.17□□□□□ -0.3
CAPN13-201ENST00000295055 DDAH1O94760 285 aa13.17□□□□□ -0.3
CAPN13-201ENST00000295055 GDF11O95390 407 aa13.17□□□□□ -0.3
CAPN13-201ENST00000295055 TTLL1O95922 423 aa13.17□□□□□ -0.3
CAPN13-201ENST00000295055 GUCY1A2P33402 732 aa13.17□□□□□ -0.3
CAPN13-201ENST00000295055 ADD1P35611 737 aaKnown RBP13.17□□□□□ -0.3
CAPN13-201ENST00000295055 TUFMP49411 452 aaKnown RBP13.17□□□□□ -0.3
CAPN13-201ENST00000295055 ARHGEF6Q15052 776 aa13.17□□□□□ -0.3
CAPN13-201ENST00000295055 PRAMEF18Q5VWM3 479 aa13.17□□□□□ -0.3
CAPN13-201ENST00000295055 PNMA8AQ86V59 439 aaPredicted RBP13.17□□□□□ -0.3
CAPN13-201ENST00000295055 DCLK2Q8N568 766 aa13.17□□□□□ -0.3
CAPN13-201ENST00000295055 CCDC155Q8N6L0 562 aa13.17□□□□□ -0.3
CAPN13-201ENST00000295055 PNMA1Q8ND90 353 aa13.17□□□□□ -0.3
CAPN13-201ENST00000295055 GREB1LQ9C091 1923 aaPredicted RBP13.17□□□□□ -0.3
CAPN13-201ENST00000295055 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms