RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 NBPF20Q3BBV1 942 aa17.33■□□□□ 0.37
SSRP1-202ENST00000293880 POLD4Q9HCU8 107 aa17.33■□□□□ 0.37
SSRP1-202ENST00000293880 PBRM1Q86U86 1689 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 RNASELQ05823 741 aaKnown RBP17.33■□□□□ 0.36
SSRP1-202ENST00000293880 SSH3Q8TE77 659 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 LBHD1Q9BQE6 289 aaPredicted RBP17.33■□□□□ 0.36
SSRP1-202ENST00000293880 PUS7LQ9H0K6 701 aaKnown RBP17.33■□□□□ 0.36
SSRP1-202ENST00000293880 PPARGC1AQ9UBK2 798 aaKnown RBP17.33■□□□□ 0.36
SSRP1-202ENST00000293880 FAM135BQ49AJ0 1406 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 ARHGEF9O43307 516 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 ALDH1B1P30837 517 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 LRRC14Q15048 493 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 ZBTB38Q8NAP3 1195 aaPredicted RBP17.33■□□□□ 0.36
SSRP1-202ENST00000293880 TBC1D22AQ8WUA7 517 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 TSPOAP1O95153 1857 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 CYP21A2P08686 494 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 CA4P22748 312 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 ARL4AP40617 200 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 TFDP1Q14186 410 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 CEP170P1Q96L14 293 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 ZFP69BQ9UJL9 534 aa17.33■□□□□ 0.36
SSRP1-202ENST00000293880 MYO1CO00159 1063 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 CAPRIN1Q14444 709 aaKnown RBP17.32■□□□□ 0.36
SSRP1-202ENST00000293880 ZNF394Q53GI3 561 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 TTC30AQ86WT1 665 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 ACTR5Q9H9F9 607 aaPredicted RBP17.32■□□□□ 0.36
SSRP1-202ENST00000293880 GTSE1Q9NYZ3 720 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 USP17L3A6NCW0 530 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 USP17L4A6NCW7 530 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 PNMA6AP0CW24 399 aaPredicted RBP17.32■□□□□ 0.36
SSRP1-202ENST00000293880 USP17L1Q7RTZ2 530 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 FBXO18Q8NFZ0 1043 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 NUDCD1Q96RS6 583 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 NOP14P78316 857 aaKnown RBP17.32■□□□□ 0.36
SSRP1-202ENST00000293880 SYT2Q8N9I0 419 aaPredicted RBP17.32■□□□□ 0.36
SSRP1-202ENST00000293880 GSDMAQ96QA5 445 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 PITPNM3Q9BZ71 974 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 MAST1Q9Y2H9 1570 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 SRGAP2CP0DJJ0 459 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 HLA-DPA1P20036 260 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 MRPS15P82914 257 aaKnown RBP17.32■□□□□ 0.36
SSRP1-202ENST00000293880 TMPRSS15P98073 1019 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 GALNT17Q6IS24 598 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 AGR3Q8TD06 166 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 EFHD1Q9BUP0 239 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 GJB4Q9NTQ9 266 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 DBNLQ9UJU6 430 aaKnown RBP17.32■□□□□ 0.36
SSRP1-202ENST00000293880 SNX24Q9Y343 169 aa17.32■□□□□ 0.36
SSRP1-202ENST00000293880 HOOK2Q96ED9 719 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 THAP9Q9H5L6 903 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 TTC7AQ9ULT0 858 aaPredicted RBP17.31■□□□□ 0.36
SSRP1-202ENST00000293880 ENO4A6NNW6 628 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 TTI1O43156 1089 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 PSMA2P25787 234 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 CCND2P30279 289 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 KRT31Q15323 416 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 SYCP2LQ5T4T6 812 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 APOA5Q6Q788 366 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 RASSF3Q86WH2 238 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 SEC31BQ9NQW1 1179 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 DCTN4Q9UJW0 460 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 A0A1W2PQ27 194 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 A0A1W2PQ64 194 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 A0A1W2PQD8 194 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 USP27XA6NNY8 438 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 GYG2O15488 501 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 HOXB7P09629 217 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 PTPREP23469 700 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 ZCWPW1Q9H0M4 648 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 EMILIN3Q9NT22 766 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 PLA2G4BP0C869 781 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 FLOT2Q14254 428 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 C1orf146Q5VVC0 180 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 KRT26Q7Z3Y9 468 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 ENOX1Q8TC92 643 aaKnown RBP17.31■□□□□ 0.36
SSRP1-202ENST00000293880 ARL8AQ96BM9 186 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 CCDC90BQ9GZT6 254 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 ZFYVE16Q7Z3T8 1539 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 USP17L8P0C7I0 530 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 SLFN14P0C7P3 912 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 NEK2P51955 445 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 AOC3Q16853 763 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 IL17REQ8NFR9 667 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.31■□□□□ 0.36
SSRP1-202ENST00000293880 TRIM11Q96F44 468 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 MIS12Q9H081 205 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 HDAC6Q9UBN7 1215 aa17.31■□□□□ 0.36
SSRP1-202ENST00000293880 IQANK1A0A1B0GTG1 560 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 ZNF211Q13398 564 aaPredicted RBP17.3■□□□□ 0.36
SSRP1-202ENST00000293880 PRR29P0C7W0 189 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 GLE1Q53GS7 698 aaKnown RBP17.3■□□□□ 0.36
SSRP1-202ENST00000293880 ALS2CLQ60I27 953 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 MIGA2Q7L4E1 593 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 METTL23Q86XA0 190 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 CRLF3Q8IUI8 442 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 BEGAINQ9BUH8 593 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 TRIM15Q9C019 465 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 GOLPH3LQ9H4A5 285 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 POLR3EQ9NVU0 708 aa17.3■□□□□ 0.36
SSRP1-202ENST00000293880 H0YCG3 227 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms