RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 KCNJ18B7U540 433 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 PDHXO00330 501 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 N4BP3O15049 544 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 GYPCP04921 128 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 NR3C2P08235 984 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 EEF1GP26641 437 aaKnown RBP18.6■□□□□ 0.57
CPSF4-201ENST00000292476 TUBB4BP68371 445 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 KCNJ12Q14500 433 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 PTPN21Q16825 1174 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 GPAT2Q6NUI2 795 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.6■□□□□ 0.57
CPSF4-201ENST00000292476 ANKRD23Q86SG2 305 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 GJA10Q969M2 543 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 THAP9Q9H5L6 903 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 EXOC1Q9NV70 894 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 BTBD7Q9P203 1132 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 ARP10275 920 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 MYCLP12524 364 aaPredicted RBP18.6■□□□□ 0.57
CPSF4-201ENST00000292476 FAM193AP78312 1265 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 ASIC1P78348 528 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 BMS1Q14692 1282 aaKnown RBP18.6■□□□□ 0.57
CPSF4-201ENST00000292476 EPHA7Q15375 998 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 GNPTABQ3T906 1256 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 ARHGAP29Q52LW3 1261 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 CATSPER3Q86XQ3 398 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 NUDT12Q9BQG2 462 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 ZMYND15Q9H091 742 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 ZFYVE28Q9HCC9 887 aa18.6■□□□□ 0.57
CPSF4-201ENST00000292476 A0A1W2PQC6 194 aa18.59■□□□□ 0.57
CPSF4-201ENST00000292476 ATP8B1O43520 1251 aa18.59■□□□□ 0.57
CPSF4-201ENST00000292476 PRCPP42785 496 aa18.59■□□□□ 0.57
CPSF4-201ENST00000292476 MRPS9P82933 396 aaKnown RBP18.59■□□□□ 0.57
CPSF4-201ENST00000292476 PSMD2Q13200 908 aa18.59■□□□□ 0.57
CPSF4-201ENST00000292476 MCM6Q14566 821 aa18.59■□□□□ 0.57
CPSF4-201ENST00000292476 COBLL1Q53SF7 1204 aa18.59■□□□□ 0.57
CPSF4-201ENST00000292476 NCAPG2Q86XI2 1143 aa18.59■□□□□ 0.57
CPSF4-201ENST00000292476 WDR24Q96S15 920 aa18.59■□□□□ 0.57
CPSF4-201ENST00000292476 EIF2AK1Q9BQI3 630 aaKnown RBP18.59■□□□□ 0.57
CPSF4-201ENST00000292476 PAGR1Q9BTK6 254 aa18.59■□□□□ 0.57
CPSF4-201ENST00000292476 MROH8Q9H579 483 aa18.59■□□□□ 0.57
CPSF4-201ENST00000292476 AGO4Q9HCK5 861 aaKnown RBP18.59■□□□□ 0.57
CPSF4-201ENST00000292476 MYO1AQ9UBC5 1043 aa18.59■□□□□ 0.57
CPSF4-201ENST00000292476 SOWAHDA6NJG2 315 aa18.58■□□□□ 0.57
CPSF4-201ENST00000292476 PSMA7O14818 248 aa18.58■□□□□ 0.57
CPSF4-201ENST00000292476 CCNA1P78396 465 aa18.58■□□□□ 0.57
CPSF4-201ENST00000292476 CYP26C1Q6V0L0 522 aa18.58■□□□□ 0.57
CPSF4-201ENST00000292476 RAD9BQ6WBX8 426 aa18.58■□□□□ 0.57
CPSF4-201ENST00000292476 UNC13DQ70J99 1090 aa18.58■□□□□ 0.57
CPSF4-201ENST00000292476 GPR161Q8N6U8 529 aaKnown RBP18.58■□□□□ 0.57
CPSF4-201ENST00000292476 GIMAP8Q8ND71 665 aaPredicted RBP18.58■□□□□ 0.57
CPSF4-201ENST00000292476 SHCBP1Q8NEM2 672 aa18.58■□□□□ 0.57
CPSF4-201ENST00000292476 DHTKD1Q96HY7 919 aaPredicted RBP18.58■□□□□ 0.57
CPSF4-201ENST00000292476 HSD17B14Q9BPX1 270 aa18.58■□□□□ 0.57
CPSF4-201ENST00000292476 POTEB3A0JP26 581 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 KLRC4O43908 158 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 KIF5CO60282 957 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 MED24O75448 989 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 PLA2G4BP0C869 781 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 CYP2C8P10632 490 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 CASP14P31944 242 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 STXBP2Q15833 593 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 POTEBQ6S5H4 581 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 TNS4Q8IZW8 715 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 LRRN4CLQ8ND94 238 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 IL31RAQ8NI17 732 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 CARD6Q9BX69 1037 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 MOV10L1Q9BXT6 1211 aaKnown RBP18.57■□□□□ 0.56
CPSF4-201ENST00000292476 MRPL44Q9H9J2 332 aaKnown RBP18.57■□□□□ 0.56
CPSF4-201ENST00000292476 ZCCHC17Q9NP64 241 aaKnown RBP18.57■□□□□ 0.56
CPSF4-201ENST00000292476 ABHD10Q9NUJ1 306 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 LGALS16A8MUM7 142 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 POTEB2H3BUK9 544 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 FKTNO75072 461 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 SPATA31C1P0DKV0 1188 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 SFNP31947 248 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 GCLCP48506 637 aaPredicted RBP18.57■□□□□ 0.56
CPSF4-201ENST00000292476 KRT76Q01546 638 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 PPP2R3AQ06190 1150 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 PDE4DQ08499 809 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 B3GNT9Q6UX72 402 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 CREBRFQ8IUR6 639 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 RDM1Q8NG50 284 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 SMCR8Q8TEV9 937 aaPredicted RBP18.57■□□□□ 0.56
CPSF4-201ENST00000292476 LRRC15Q8TF66 581 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 DDX12PQ92771 950 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 INPP4AQ96PE3 977 aaPredicted RBP18.57■□□□□ 0.56
CPSF4-201ENST00000292476 RBPJLQ9UBG7 517 aa18.57■□□□□ 0.56
CPSF4-201ENST00000292476 LOC102724159A0A0B4J2E5 919 aa18.56■□□□□ 0.56
CPSF4-201ENST00000292476 BICDL2A1A5D9 508 aa18.56■□□□□ 0.56
CPSF4-201ENST00000292476 MYMKA6NI61 221 aa18.56■□□□□ 0.56
CPSF4-201ENST00000292476 EIF3JO75822 258 aaKnown RBP18.56■□□□□ 0.56
CPSF4-201ENST00000292476 EYA4O95677 639 aa18.56■□□□□ 0.56
CPSF4-201ENST00000292476 FXR1P51114 621 aaKnown RBP eCLIP18.56■□□□□ 0.56
CPSF4-201ENST00000292476 CLCN6P51797 869 aa18.56■□□□□ 0.56
CPSF4-201ENST00000292476 JAK3P52333 1124 aa18.56■□□□□ 0.56
CPSF4-201ENST00000292476 PWP2Q15269 919 aaKnown RBP18.56■□□□□ 0.56
CPSF4-201ENST00000292476 ECM1Q16610 540 aa18.56■□□□□ 0.56
CPSF4-201ENST00000292476 RSRC2Q7L4I2 434 aaKnown RBP18.56■□□□□ 0.56
CPSF4-201ENST00000292476 MIER3Q7Z3K6 550 aa18.56■□□□□ 0.56
CPSF4-201ENST00000292476 CCDC65Q8IXS2 484 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms