RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ZNF445P59923 1031 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 KARSQ15046 597 aaKnown RBP9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 MAP3K21Q5TCX8 1036 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 EXOC8Q8IYI6 725 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 PAGE5Q96GU1 130 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 GPR20Q99678 358 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 TCHPQ9BT92 498 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 GNEQ9Y223 722 aaKnown RBP9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 SIP14410 1827 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 COL1A2P08123 1366 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 PP2D1A8MPX8 630 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 GGPS1O95749 300 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 AKR1A1P14550 325 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 FLT3LGP49771 235 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 LONRF3Q496Y0 759 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 SPECC1Q5M775 1068 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 USP49Q70CQ1 688 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 SV2BQ7L1I2 683 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 DYDC2Q96IM9 177 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 LXNQ9BS40 222 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 BLOC1S4Q9NUP1 217 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 TMEM63CQ9P1W3 806 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 SERTAD1Q9UHV2 236 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 TUBE1Q9UJT0 475 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 DNM3Q9UQ16 869 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 KPNA6O60684 536 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 SMC2O95347 1197 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 ARIH2O95376 493 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 TNFAIP2Q03169 654 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 POSTNQ15063 836 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 ZSCAN23Q3MJ62 389 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 CAVIN1Q6NZI2 390 aaKnown RBP9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 SEPT1Q8WYJ6 367 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 TRIB2Q92519 343 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 DHX58Q96C10 678 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 PANK2Q9BZ23 570 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 MLXIPQ9HAP2 919 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 RMND1Q9NWS8 449 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 GABRQQ9UN88 632 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 CYP2B6P20813 491 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 HTRA3P83110 453 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 DPYDQ12882 1025 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 CYFIP1Q7L576 1253 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 DHX37Q8IY37 1157 aaKnown RBP9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 SYT2Q8N9I0 419 aaPredicted RBP9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 ZNF302Q9NR11 478 aa9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 MAGEC2Q9UBF1 373 aaPredicted RBP9.38□□□□□ -0.91
PTPDC1-201ENST00000288976 SMPD1P17405 629 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 SCP2P22307 547 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 SLC12A3P55017 1021 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 ECM1Q16610 540 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 COBLL1Q53SF7 1204 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 GJA10Q969M2 543 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 CAVIN2O95810 425 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 CPT1AP50416 773 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 KCNB1Q14721 858 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 LY6KQ17RY6 165 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 OTUD6AQ7L8S5 288 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 GSDMAQ96QA5 445 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 KIAA1024Q9UPX6 916 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 POTEB3A0JP26 581 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 MACROD2A1Z1Q3 448 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 CHMP2AO43633 222 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 MSCO60682 206 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 CST5P28325 142 aaPredicted RBP9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 SARSP49591 514 aaKnown RBP9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 CCL14Q16627 93 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 CCDC144BQ3MJ40 725 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 POTEBQ6S5H4 581 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 SPATA33Q96N06 139 aa9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 NIFKQ9BYG3 293 aaKnown RBP9.37□□□□□ -0.91
PTPDC1-201ENST00000288976 PVALEFA0A1B0GWK0 134 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 GSTTP1A0A1W2PQM5 241 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 SEPT4O43236 478 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 GJA9P57773 515 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 KCNN1Q92952 543 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 ZHX1Q9UKY1 873 aaPredicted RBP9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 ODF2LQ9ULJ1 636 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 CEP290O15078 2479 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 DUSP11O75319 330 aaKnown RBP9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 MMP3P08254 477 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 PLA2G4BP0C869 781 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 GUCY2CP25092 1073 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 PPP1R2P41236 205 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 ADCYAP1R1P41586 468 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 XKR3Q5GH77 459 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 KLHL10Q6JEL2 608 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 SMARCAD1Q9H4L7 1026 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 PDGFCQ9NRA1 345 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 PKD2L1Q9P0L9 805 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 KIAA1468Q9P260 1216 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 FRMD3A2A2Y4 597 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 A6NJR5 290 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 DDX39AO00148 427 aaKnown RBP9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 NOP56O00567 594 aaKnown RBP9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 ADCY3O60266 1144 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 STBD1O95210 358 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 KIF20AO95235 890 aa9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 TCF7P36402 384 aaPredicted RBP9.36□□□□□ -0.91
PTPDC1-201ENST00000288976 SLC17A8Q8NDX2 589 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms