RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 ODR4Q5SWX8 454 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 MIGA2Q7L4E1 593 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 ELMOD1Q8N336 334 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 RABGGTAQ92696 567 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 PRMT6Q96LA8 375 aaPredicted RBP7.55□□□□□ -1.2
VPS8-201ENST00000287546 ZSWIM4Q9H7M6 989 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 CAPN11Q9UMQ6 739 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 DAAM1Q9Y4D1 1078 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 SAR1BQ9Y6B6 198 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 AFPP02771 609 aaKnown RBP7.55□□□□□ -1.2
VPS8-201ENST00000287546 SREBF1P36956 1147 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 ELF2Q15723 593 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 CEP55Q53EZ4 464 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 C10orf76Q5T2E6 689 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 E4F1Q66K89 784 aaPredicted RBP7.55□□□□□ -1.2
VPS8-201ENST00000287546 SMC1BQ8NDV3 1235 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 RAET1EQ8TD07 263 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 CCDC66A2RUB6 948 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 TRIM49BA6NDI0 452 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 TEX33O43247 280 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 TCP1P17987 556 aaKnown RBP7.55□□□□□ -1.2
VPS8-201ENST00000287546 HOXA13P31271 388 aaPredicted RBP7.55□□□□□ -1.2
VPS8-201ENST00000287546 KCTD2Q14681 263 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 BRD3Q15059 726 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 EPHA7Q15375 998 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 EDRF1Q3B7T1 1238 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 TYW1BQ6NUM6 668 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 NYAP1Q6ZVC0 841 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 TC2NQ8N9U0 490 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 TIPINQ9BVW5 301 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 BHMT2Q9H2M3 363 aa7.55□□□□□ -1.2
VPS8-201ENST00000287546 POTEB3A0JP26 581 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 SOWAHDA6NJG2 315 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 POTECB2RU33 542 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 CCND2P30279 289 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 SFNP31947 248 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 EXOC3L4Q17RC7 722 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 Q4G0T1 1027 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 POTEBQ6S5H4 581 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 POLR3CQ9BUI4 534 aaPredicted RBP7.54□□□□□ -1.2
VPS8-201ENST00000287546 TYW1Q9NV66 732 aaKnown RBP7.54□□□□□ -1.2
VPS8-201ENST00000287546 TXNDC16Q9P2K2 825 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.54□□□□□ -1.2
VPS8-201ENST00000287546 ADGRG1Q9Y653 693 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 V9GYY5 206 aaPredicted RBP7.54□□□□□ -1.2
VPS8-201ENST00000287546 NAV1Q8NEY1 1877 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 LY75O60449 1722 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 TMCO5BA8MYB1 307 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 DDX39AO00148 427 aaKnown RBP7.54□□□□□ -1.2
VPS8-201ENST00000287546 ATP8B1O43520 1251 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 TATDN1Q6P1N9 297 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 XRRA1Q6P2D8 792 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 LDHDQ86WU2 507 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 SYCE1Q8N0S2 351 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 PKD2L1Q9P0L9 805 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 POLIQ9UNA4 740 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 UBE4BO95155 1302 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 IGKV6D-41A0A0C4DH26 115 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 SHTN1A0MZ66 631 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 TESPA1A2RU30 521 aaPredicted RBP7.54□□□□□ -1.2
VPS8-201ENST00000287546 MYMKA6NI61 221 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 CTNND1O60716 968 aaKnown RBP7.54□□□□□ -1.2
VPS8-201ENST00000287546 GMNNO75496 209 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 CAP2P40123 477 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 STAT1P42224 750 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 KRT76Q01546 638 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 ANKRD40Q6AI12 368 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 SRGAP1Q7Z6B7 1085 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 PGBD3Q8N328 593 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 NLGN2Q8NFZ4 835 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 RIT2Q99578 217 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 MYOZ2Q9NPC6 264 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 CWC15Q9P013 229 aaKnown RBP7.54□□□□□ -1.2
VPS8-201ENST00000287546 CEP72Q9P209 647 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 AFG3L2Q9Y4W6 797 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 CACNA1SQ13698 1873 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 A0A1W2PQJ5 194 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 CCDC169A6NNP5 214 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 E9PMD0 336 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 K7ENM7 598 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 TLR3O15455 904 aaKnown RBP7.54□□□□□ -1.2
VPS8-201ENST00000287546 VIL1P09327 827 aaKnown RBP7.54□□□□□ -1.2
VPS8-201ENST00000287546 TNNC1P63316 161 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 GRB10Q13322 594 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 RASA3Q14644 834 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 LRRC41Q15345 812 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 KNOP1Q1ED39 458 aaKnown RBP7.54□□□□□ -1.2
VPS8-201ENST00000287546 FIGNQ5HY92 759 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 FOXR2Q6PJQ5 311 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 KIFAP3Q92845 792 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 FAM81BQ96LP2 452 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 ACCSQ96QU6 501 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 NLRC4Q9NPP4 1024 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 STIM2Q9P246 746 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 FAM198AQ9UFP1 575 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 FAM169AQ9Y6X4 670 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 C4AP0C0L4 1744 aa7.54□□□□□ -1.2
VPS8-201ENST00000287546 TAF1P21675 1872 aa7.53□□□□□ -1.2
VPS8-201ENST00000287546 COL24A1Q17RW2 1714 aa7.53□□□□□ -1.2
VPS8-201ENST00000287546 ARHGEF37A1IGU5 675 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms