RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 SLC44A5Q8NCS7 719 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 LSM14BQ9BX40 385 aaKnown RBP12.42□□□□□ -0.42
SCLT1-201ENST00000281142 TPX2Q9ULW0 747 aaKnown RBP12.42□□□□□ -0.42
SCLT1-201ENST00000281142 ZBTB12Q9Y330 459 aaPredicted RBP12.42□□□□□ -0.42
SCLT1-201ENST00000281142 ZNF541Q9H0D2 1346 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 GOLGA6L7A0A1B0GV03 622 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 GMNCA6NCL1 334 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 VIL1P09327 827 aaKnown RBP12.42□□□□□ -0.42
SCLT1-201ENST00000281142 RAPGEF1Q13905 1077 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 NAB2Q15742 525 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 FAM83BQ5T0W9 1011 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 WLSQ5T9L3 541 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 C9orf131Q5VYM1 1079 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 TEX11Q8IYF3 940 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 FAM133AQ8N9E0 248 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 MDM1Q8TC05 714 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 WHAMMQ8TF30 809 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 PNMA5Q96PV4 448 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 DDX47Q9H0S4 455 aaKnown RBP12.42□□□□□ -0.42
SCLT1-201ENST00000281142 TAF1DQ9H5J8 278 aaPredicted RBP12.42□□□□□ -0.42
SCLT1-201ENST00000281142 TMEM260Q9NX78 707 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 TBC1D7Q9P0N9 293 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 NOVA2Q9UNW9 492 aaKnown RBP12.42□□□□□ -0.42
SCLT1-201ENST00000281142 GCOM1H8Y6P7 765 aaPredicted RBP12.41□□□□□ -0.42
SCLT1-201ENST00000281142 MYZAPP0CAP1 466 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 CTNNA1P35221 906 aaKnown RBP12.41□□□□□ -0.42
SCLT1-201ENST00000281142 DIXDC1Q155Q3 683 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 ANKRD20A8PQ5CZ79 823 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 RNF10Q8N5U6 811 aaKnown RBP12.41□□□□□ -0.42
SCLT1-201ENST00000281142 UBLCP1Q8WVY7 318 aaPredicted RBP12.41□□□□□ -0.42
SCLT1-201ENST00000281142 RAPGEF5Q92565 580 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 GJA10Q969M2 543 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 SEC16BQ96JE7 1060 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 PLCB1Q9NQ66 1216 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 FBXL5Q9UKA1 691 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 POTEMA6NI47 508 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 TRAPPC3O43617 180 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 MYBP10242 640 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 ITGA4P13612 1032 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 SLC9C1Q4G0N8 1177 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 ODF2Q5BJF6 829 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 SFMBT2Q5VUG0 894 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 SPTY2D1Q68D10 685 aaPredicted RBP12.41□□□□□ -0.42
SCLT1-201ENST00000281142 PPP4R3AQ6IN85 833 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 RSBN1LQ6PCB5 846 aaPredicted RBP12.41□□□□□ -0.42
SCLT1-201ENST00000281142 CCDC84Q86UT8 332 aaPredicted RBP12.41□□□□□ -0.42
SCLT1-201ENST00000281142 KIAA0825Q8IV33 1275 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 PARP9Q8IXQ6 854 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 MCM9Q9NXL9 1143 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 SSU72P8A0A1W2PR75 194 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 GOLGA6L10A6NI86 522 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 CEP104O60308 925 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 FKBP1AP62942 108 aaKnown RBP12.41□□□□□ -0.42
SCLT1-201ENST00000281142 C11orf91Q3C1V1 193 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 CIAPIN1Q6FI81 312 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 DZIP1Q86YF9 867 aaKnown RBP12.41□□□□□ -0.42
SCLT1-201ENST00000281142 BARHL2Q9NY43 387 aa12.41□□□□□ -0.42
SCLT1-201ENST00000281142 RBAK-RBAKDNI3L0D1 243 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 PRPHP41219 470 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 SV2BQ7L1I2 683 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 ISCUQ9H1K1 167 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 CUEDC2Q9H467 287 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 VAT1LQ9HCJ6 419 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 SH3GLB2Q9NR46 395 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 BIN2Q9UBW5 565 aaPredicted RBP12.4□□□□□ -0.42
SCLT1-201ENST00000281142 TSKSQ9UJT2 592 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 PCDHGC5Q9Y5F6 944 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 DAPK3O43293 454 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 SCTRP47872 440 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 SCNN1DP51172 638 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 CDR1P51861 262 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 MRPL12P52815 198 aaKnown RBP12.4□□□□□ -0.42
SCLT1-201ENST00000281142 NAPAP54920 295 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 MAGOHP61326 146 aaKnown RBP12.4□□□□□ -0.42
SCLT1-201ENST00000281142 SNCBQ16143 134 aa12.4□□□□□ -0.42
SCLT1-201ENST00000281142 MAGOHBQ96A72 148 aaKnown RBP12.4□□□□□ -0.42
SCLT1-201ENST00000281142 CELF4Q9BZC1 486 aaKnown RBP12.4□□□□□ -0.42
SCLT1-201ENST00000281142 MYH7BA7E2Y1 1941 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 SERPING1P05155 500 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 EIF6P56537 245 aaKnown RBP12.39□□□□□ -0.43
SCLT1-201ENST00000281142 INHBEP58166 350 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 CACNB1Q02641 598 aaPredicted RBP12.39□□□□□ -0.43
SCLT1-201ENST00000281142 BIRC2Q13490 618 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 GRM4Q14833 912 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 UNC13DQ70J99 1090 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 NELFCDQ8IXH7 590 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 TBCKQ8TEA7 893 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 GMLQ99445 158 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 RNF14Q9UBS8 474 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 AMACRQ9UHK6 382 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 TMEM59LQ9UK28 342 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 STX8Q9UNK0 236 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 TRAF5O00463 557 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 ACTN1P12814 892 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 TNNC1P63316 161 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 ECM1Q16610 540 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 CALML4Q96GE6 196 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 TRIM31Q9BZY9 425 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 SUGT1Q9Y2Z0 365 aa12.39□□□□□ -0.43
SCLT1-201ENST00000281142 PCDHAC2Q9Y5I4 1007 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms