RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 FAM114A1Q8IWE2 563 aa23.23■■□□□ 1.31
YBX3-202ENST00000279550 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.23■■□□□ 1.316e-8■□□□□ 9.9
YBX3-202ENST00000279550 UBIAD1Q9Y5Z9 338 aa23.23■■□□□ 1.31
YBX3-202ENST00000279550 POTEB2H3BUK9 544 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 RIOK3O14730 519 aaKnown RBP23.22■■□□□ 1.31
YBX3-202ENST00000279550 BCRP11274 1271 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 PRKCSHP14314 528 aaPredicted RBP23.22■■□□□ 1.31
YBX3-202ENST00000279550 CCND2P30279 289 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 MTIF2P46199 727 aaKnown RBP23.22■■□□□ 1.31
YBX3-202ENST00000279550 MTF1Q14872 753 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 TAF1CQ15572 869 aaPredicted RBP23.22■■□□□ 1.31
YBX3-202ENST00000279550 ZCWPW2Q504Y3 356 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 HERC4Q5GLZ8 1057 aaPredicted RBP23.22■■□□□ 1.31
YBX3-202ENST00000279550 MIIPQ5JXC2 388 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 CYP4F22Q6NT55 531 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 B3GNT9Q6UX72 402 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 LRRC55Q6ZSA7 311 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 VSIG10LQ86VR7 867 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 MMP19Q99542 508 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 REEP2Q9BRK0 252 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 RUSC1Q9BVN2 902 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 LCTP09848 1927 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 PES1O00541 588 aaKnown RBP23.22■■□□□ 1.31
YBX3-202ENST00000279550 SLITRK3O94933 977 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 EYA4O95677 639 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 GRM1Q13255 1194 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 KCTD2Q14681 263 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 ZNF592Q92610 1267 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 WDR11Q9BZH6 1224 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 BHMT2Q9H2M3 363 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 BCAS3Q9H6U6 928 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 TUFT1Q9NNX1 390 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 CREBZFQ9NS37 354 aa23.22■■□□□ 1.31
YBX3-202ENST00000279550 ASTN1O14525 1302 aa23.21■■□□□ 1.31
YBX3-202ENST00000279550 ADGRA2Q96PE1 1338 aa23.21■■□□□ 1.31
YBX3-202ENST00000279550 A0A1W2PQC6 194 aa23.21■■□□□ 1.31
YBX3-202ENST00000279550 SOWAHDA6NJG2 315 aa23.21■■□□□ 1.31
YBX3-202ENST00000279550 FECHP22830 423 aa23.21■■□□□ 1.31
YBX3-202ENST00000279550 LRRC63Q05C16 580 aa23.21■■□□□ 1.31
YBX3-202ENST00000279550 FAM133AQ8N9E0 248 aa23.21■■□□□ 1.31
YBX3-202ENST00000279550 IWS1Q96ST2 819 aa23.21■■□□□ 1.31
YBX3-202ENST00000279550 ZIC5Q96T25 663 aa23.21■■□□□ 1.31
YBX3-202ENST00000279550 JADE2Q9NQC1 790 aa23.21■■□□□ 1.31
YBX3-202ENST00000279550 PKD2L1Q9P0L9 805 aa23.21■■□□□ 1.31
YBX3-202ENST00000279550 PPP2R2CQ9Y2T4 447 aa23.21■■□□□ 1.31
YBX3-202ENST00000279550 DNAJC25-GNG10A0A024R161 153 aa23.2■■□□□ 1.3
YBX3-202ENST00000279550 IPO5O00410 1097 aaKnown RBP23.2■■□□□ 1.3
YBX3-202ENST00000279550 ZBTB39O15060 712 aa23.2■■□□□ 1.3
YBX3-202ENST00000279550 TM4SF4P48230 202 aa23.2■■□□□ 1.3
YBX3-202ENST00000279550 DNM2P50570 870 aa23.2■■□□□ 1.3
YBX3-202ENST00000279550 APLP1P51693 650 aa23.2■■□□□ 1.3
YBX3-202ENST00000279550 RAD9BQ6WBX8 426 aa23.2■■□□□ 1.3
YBX3-202ENST00000279550 CNGA4Q8IV77 575 aa23.2■■□□□ 1.3
YBX3-202ENST00000279550 TPH2Q8IWU9 490 aa23.2■■□□□ 1.3
YBX3-202ENST00000279550 PIGOQ8TEQ8 1089 aa23.2■■□□□ 1.3
YBX3-202ENST00000279550 SCFD1Q8WVM8 642 aa23.2■■□□□ 1.3
YBX3-202ENST00000279550 TEKT3Q9BXF9 490 aa23.2■■□□□ 1.3
YBX3-202ENST00000279550 ZHX3Q9H4I2 956 aa23.2■■□□□ 1.3
YBX3-202ENST00000279550 KCNH7Q9NS40 1196 aa23.2■■□□□ 1.3
YBX3-202ENST00000279550 WRAP73Q9P2S5 460 aaPredicted RBP23.2■■□□□ 1.3
YBX3-202ENST00000279550 RASSF10A6NK89 507 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 RSPH10B2B2RC85 870 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 RSPH10BP0C881 870 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 ALDH5A1P51649 535 aaPredicted RBP23.19■■□□□ 1.3
YBX3-202ENST00000279550 MTMR1Q13613 665 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 TRIM14Q14142 442 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 SFR1Q86XK3 245 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 NELFCDQ8IXH7 590 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 CCDC51Q96ER9 411 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 DESI2Q9BSY9 194 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 DDX39AO00148 427 aaKnown RBP23.19■■□□□ 1.3
YBX3-202ENST00000279550 PGK2P07205 417 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 KLK7P49862 253 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 CASP5P51878 434 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 FOXR2Q6PJQ5 311 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 TSG101Q99816 390 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 NOC4LQ9BVI4 516 aaKnown RBP23.19■■□□□ 1.3
YBX3-202ENST00000279550 POLD4Q9HCU8 107 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 CPA4Q9UI42 421 aa23.19■■□□□ 1.3
YBX3-202ENST00000279550 SOWAHBA6NEL2 793 aa23.18■■□□□ 1.3
YBX3-202ENST00000279550 STAM2O75886 525 aa23.18■■□□□ 1.3
YBX3-202ENST00000279550 TPM1P09493 284 aa23.18■■□□□ 1.3
YBX3-202ENST00000279550 NOGQ13253 232 aa23.18■■□□□ 1.3
YBX3-202ENST00000279550 EPHA7Q15375 998 aa23.18■■□□□ 1.3
YBX3-202ENST00000279550 DEFB115Q30KQ5 88 aa23.18■■□□□ 1.3
YBX3-202ENST00000279550 INPP4AQ96PE3 977 aaPredicted RBP23.18■■□□□ 1.3
YBX3-202ENST00000279550 RIT2Q99578 217 aa23.18■■□□□ 1.3
YBX3-202ENST00000279550 KCTD10Q9H3F6 313 aa23.18■■□□□ 1.3
YBX3-202ENST00000279550 ABHD10Q9NUJ1 306 aa23.18■■□□□ 1.3
YBX3-202ENST00000279550 TTC26A0AVF1 554 aa23.17■■□□□ 1.3
YBX3-202ENST00000279550 DHX15O43143 795 aaKnown RBP23.17■■□□□ 1.3
YBX3-202ENST00000279550 CCP110O43303 1012 aa23.17■■□□□ 1.3
YBX3-202ENST00000279550 TLR2O60603 784 aa23.17■■□□□ 1.3
YBX3-202ENST00000279550 TBC1D8BQ0IIM8 1120 aa23.17■■□□□ 1.3
YBX3-202ENST00000279550 ITGB3BPQ13352 177 aaPredicted RBP23.17■■□□□ 1.3
YBX3-202ENST00000279550 SYCP1Q15431 976 aa23.17■■□□□ 1.3
YBX3-202ENST00000279550 RINT1Q6NUQ1 792 aa23.17■■□□□ 1.3
YBX3-202ENST00000279550 ABRAQ8N0Z2 381 aa23.17■■□□□ 1.3
YBX3-202ENST00000279550 AGO4Q9HCK5 861 aaKnown RBP23.17■■□□□ 1.3
YBX3-202ENST00000279550 STRNO43815 780 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms