RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 NFIL3Q16649 462 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 Q4G0T1 1027 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 PODNQ7Z5L7 613 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 TRIM59Q8IWR1 403 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 NOA1Q8NC60 698 aaKnown RBP11.09□□□□□ -0.63
CPNE9-201ENST00000273027 SLC17A8Q8NDX2 589 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 AFAP1L1Q8TED9 768 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 LMBR1Q8WVP7 490 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 TEKT1Q969V4 418 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 ARMC5Q96C12 935 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 OSBPL9Q96SU4 736 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 PLIN2Q99541 437 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 LACRTQ9GZZ8 138 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 UBA5Q9GZZ9 404 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 EFCC1Q9HA90 598 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 ST7Q9NRC1 585 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 TRAF3IP3Q9Y228 551 aa11.09□□□□□ -0.63
CPNE9-201ENST00000273027 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.09□□□□□ -0.63
CPNE9-201ENST00000273027 A0A0U1RQJ8 604 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 GTPBP10A4D1E9 387 aaKnown RBP11.08□□□□□ -0.64
CPNE9-201ENST00000273027 IGF2BP3O00425 579 aaKnown RBP eCLIP11.08□□□□□ -0.64
CPNE9-201ENST00000273027 PDXKO00764 312 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 SLC16A3O15427 465 aaKnown RBP11.08□□□□□ -0.64
CPNE9-201ENST00000273027 COBLO75128 1261 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 ABL1P00519 1130 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 MYCP01106 439 aaPredicted RBP11.08□□□□□ -0.64
CPNE9-201ENST00000273027 EPB41P11171 864 aaKnown RBP11.08□□□□□ -0.64
CPNE9-201ENST00000273027 GAP43P17677 238 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 CIITAP33076 1130 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 TNNI2P48788 182 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 LMAN1P49257 510 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 HNRNPH2P55795 449 aaKnown RBP11.08□□□□□ -0.64
CPNE9-201ENST00000273027 CDC37Q16543 378 aaPredicted RBP11.08□□□□□ -0.64
CPNE9-201ENST00000273027 SLC18A3Q16572 532 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 STXBP4Q6ZWJ1 553 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 RRAGAQ7L523 313 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 VPS36Q86VN1 386 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 CREG2Q8IUH2 290 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 IFT20Q8IY31 132 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 SPATA4Q8NEY3 305 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 ATRIPQ8WXE1 791 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 CAVIN3Q969G5 261 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 COA7Q96BR5 231 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 IDI2Q9BXS1 227 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 VPS18Q9P253 973 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 HPCAL4Q9UM19 191 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 UBE4BO95155 1302 aa11.08□□□□□ -0.64
CPNE9-201ENST00000273027 HTTP42858 3142 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 LRRC53A6NM62 1247 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 H3BQF6 201 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 SLC37A4O43826 429 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 TDP2O95551 362 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 CCDC172P0C7W6 258 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 PLA2G4BP0C869 781 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 AKR1B1P15121 316 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 CAPN2P17655 700 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 RPA1P27694 616 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 SHMT1P34896 483 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 GTF2IP78347 998 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 CRHR2Q13324 411 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 NAB2Q15742 525 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 PPP2R5EQ16537 467 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 BMT2Q1RMZ1 405 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 SLC4A8Q2Y0W8 1093 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 FAM83BQ5T0W9 1011 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 DYMQ7RTS9 669 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 SYT2Q8N9I0 419 aaPredicted RBP11.07□□□□□ -0.64
CPNE9-201ENST00000273027 GMCL1P1Q8NEA9 526 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 AENQ8WTP8 325 aaKnown RBP11.07□□□□□ -0.64
CPNE9-201ENST00000273027 HAS1Q92839 578 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 GMCL1Q96IK5 515 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 CLMNQ96JQ2 1002 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 PBKQ96KB5 322 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 ZDHHC15Q96MV8 337 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 POLR3CQ9BUI4 534 aaPredicted RBP11.07□□□□□ -0.64
CPNE9-201ENST00000273027 SELENOOQ9BVL4 669 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 AMNQ9BXJ7 453 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 ANO3Q9BYT9 981 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 TANGO6Q9C0B7 1094 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 EHMT1Q9H9B1 1298 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 GPCPD1Q9NPB8 672 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 USP40Q9NVE5 1235 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 TMEM260Q9NX78 707 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 KCND2Q9NZV8 630 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 PI4KBQ9UBF8 816 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 SEL1LQ9UBV2 794 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 DNM3Q9UQ16 869 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 MTMR7Q9Y216 660 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 JAG2Q9Y219 1238 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 DIS3Q9Y2L1 958 aaKnown RBP11.07□□□□□ -0.64
CPNE9-201ENST00000273027 RABGAP1Q9Y3P9 1069 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 PCDHGC5Q9Y5F6 944 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 A0A0C4DFX4 3053 aa11.07□□□□□ -0.64
CPNE9-201ENST00000273027 A0A0A6YYK5 440 aaPredicted RBP11.06□□□□□ -0.64
CPNE9-201ENST00000273027 MACROD2A1Z1Q3 448 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 RCCD1A6NED2 376 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 POTEMA6NI47 508 aa11.06□□□□□ -0.64
CPNE9-201ENST00000273027 SRRM3A6NNA2 597 aaPredicted RBP11.06□□□□□ -0.64
CPNE9-201ENST00000273027 LRRIQ3A6PVS8 624 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms