RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 IFT43Q96FT9 208 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 TRIM39Q9HCM9 518 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 PRKAG2Q9UGJ0 569 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 HPCAL4Q9UM19 191 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 POLR2FP61218 127 aaKnown RBP16.87■□□□□ 0.29
UBR3-201ENST00000272793 KIF23Q02241 960 aaPredicted RBP16.87■□□□□ 0.29
UBR3-201ENST00000272793 FAM47EQ6ZV65 393 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 CARD9Q9H257 536 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 TSPAN9O75954 239 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 NCALDP61601 193 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 C10orf76Q5T2E6 689 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 ANKS3Q6ZW76 656 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 SEPT3Q9UH03 358 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 KDM3AQ9Y4C1 1321 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 PLTPP55058 493 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 C2orf54Q08AI8 447 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 PTPN21Q16825 1174 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 CABP7Q86V35 215 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 TRIM11Q96F44 468 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 PBXIP1Q96AQ6 731 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 PLEKHA8Q96JA3 519 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 DDX25Q9UHL0 483 aaKnown RBP16.87■□□□□ 0.29
UBR3-201ENST00000272793 IL10P22301 178 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 TRIM63Q969Q1 353 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 PRDM5Q9NQX1 630 aaPredicted RBP16.86■□□□□ 0.29
UBR3-201ENST00000272793 MYH3P11055 1940 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 FOSP01100 380 aaPredicted RBP16.86■□□□□ 0.29
UBR3-201ENST00000272793 IL15P40933 162 aaPredicted RBP16.86■□□□□ 0.29
UBR3-201ENST00000272793 POU5F1BQ06416 359 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 PWP1Q13610 501 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 EAPPQ56P03 285 aaPredicted RBP16.86■□□□□ 0.29
UBR3-201ENST00000272793 VPS37AQ8NEZ2 397 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 MBD2Q9UBB5 411 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 ATP6V1C1P21283 382 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 MTERF2Q49AM1 385 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 TBC1D1Q86TI0 1168 aaPredicted RBP16.86■□□□□ 0.29
UBR3-201ENST00000272793 GPBP1Q86WP2 473 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 C10orf88Q9H8K7 445 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 MYO1DO94832 1006 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 SLC1A4P43007 532 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 GLT8D2Q9H1C3 349 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 ARL4AP40617 200 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 MORC3Q14149 939 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 TESK2Q96S53 571 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 N4BP1O75113 896 aaKnown RBP16.86■□□□□ 0.29
UBR3-201ENST00000272793 ATP8B2P98198 1209 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 TCIRG1Q13488 830 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 OR8K1Q8NGG5 319 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 OSBPL1AQ9BXW6 950 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 KCNG1Q9UIX4 513 aa16.86■□□□□ 0.29
UBR3-201ENST00000272793 NACADO15069 1562 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 COPS2P61201 443 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 DZIP3Q86Y13 1208 aaKnown RBP16.85■□□□□ 0.29
UBR3-201ENST00000272793 PLEKHM2Q8IWE5 1019 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 SLC27A2O14975 620 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 PTK2Q05397 1052 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 CENPPQ6IPU0 288 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 PLEKHA5Q9HAU0 1116 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 MYO1GB0I1T2 1018 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 ACSL3O95573 720 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 DDIASQ8IXT1 998 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 PITPNM3Q9BZ71 974 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 PDE9AO76083 593 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 ARMCX6Q7L4S7 300 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 BTBD6Q96KE9 485 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 CNOT10Q9H9A5 744 aaKnown RBP16.85■□□□□ 0.29
UBR3-201ENST00000272793 RPRD1BQ9NQG5 326 aaKnown RBP16.85■□□□□ 0.29
UBR3-201ENST00000272793 PCDHGA3Q9Y5H0 932 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 PPP2R3BQ9Y5P8 575 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 ARF3P61204 181 aaPredicted RBP16.85■□□□□ 0.29
UBR3-201ENST00000272793 ARF1P84077 181 aaKnown RBP16.85■□□□□ 0.29
UBR3-201ENST00000272793 CTTNQ14247 550 aaKnown RBP16.85■□□□□ 0.29
UBR3-201ENST00000272793 RCN1Q15293 331 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 TRIP13Q15645 432 aaPredicted RBP16.85■□□□□ 0.29
UBR3-201ENST00000272793 NBPF9Q3BBW0 867 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 DCAF4L1Q3SXM0 396 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 EGFL8Q99944 293 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 TUFT1Q9NNX1 390 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 EHD2Q9NZN4 543 aa16.85■□□□□ 0.29
UBR3-201ENST00000272793 JAK2O60674 1132 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 FMO2Q99518 471 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 LRWD1Q9UFC0 647 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 SLC7A5Q01650 507 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 FASTKD5Q7L8L6 764 aaKnown RBP16.84■□□□□ 0.29
UBR3-201ENST00000272793 ARMT1Q9H993 441 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 ZFP69BQ9UJL9 534 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 KDM2BQ8NHM5 1336 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 C5orf58C9J3I9 102 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 RNF103O00237 685 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 ANXA13P27216 316 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 DENND6AQ8IWF6 608 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 DIS3L2Q8IYB7 885 aaKnown RBP16.84■□□□□ 0.29
UBR3-201ENST00000272793 SYBUQ9NX95 663 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 MID2Q9UJV3 735 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 RECQLP46063 649 aaPredicted RBP16.84■□□□□ 0.29
UBR3-201ENST00000272793 CNPY4Q8N129 248 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 MPP4Q96JB8 637 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 KRT84Q9NSB2 600 aa16.84■□□□□ 0.29
UBR3-201ENST00000272793 AP1B1Q10567 949 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms