RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 NLRX1Q86UT6 975 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 LRCH3Q96II8 777 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 ANO3Q9BYT9 981 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 CCSER1Q9C0I3 900 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 TRIP12Q14669 1992 aaPredicted RBP27.55■■■□□ 2
SSBP4-201ENST00000270061 PPFIA4O75335 1185 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 TXLNAP40222 546 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 NLRP12P59046 1061 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 PTPN11Q06124 597 aaPredicted RBP27.55■■■□□ 2
SSBP4-201ENST00000270061 PNOCQ13519 176 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 NEDD9Q14511 834 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 POSTNQ15063 836 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 ZRSR1Q15695 479 aaKnown RBP27.55■■■□□ 2
SSBP4-201ENST00000270061 C9orf50Q5SZB4 431 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 MOXD1Q6UVY6 613 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 TMEM199Q8N511 208 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 IQUBQ8NA54 791 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 PPP1R13LQ8WUF5 828 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 CRYGNQ8WXF5 182 aa27.55■■■□□ 2
SSBP4-201ENST00000270061 CYP3A7-CYP3A51PA0A087WV96 503 aa27.54■■■□□ 2
SSBP4-201ENST00000270061 CYP3A7P24462 503 aa27.54■■■□□ 2
SSBP4-201ENST00000270061 SEMA3FQ13275 785 aa27.54■■■□□ 2
SSBP4-201ENST00000270061 E2F4Q16254 413 aa27.54■■■□□ 2
SSBP4-201ENST00000270061 NT5DC1Q5TFE4 455 aa27.54■■■□□ 2
SSBP4-201ENST00000270061 KAT2BQ92831 832 aa27.54■■■□□ 2
SSBP4-201ENST00000270061 DHX58Q96C10 678 aa27.54■■■□□ 2
SSBP4-201ENST00000270061 KATNAL1Q9BW62 490 aa27.54■■■□□ 2
SSBP4-201ENST00000270061 HOXD8P13378 290 aaPredicted RBP27.53■■■□□ 2
SSBP4-201ENST00000270061 CYP2C18P33260 490 aa27.53■■■□□ 2
SSBP4-201ENST00000270061 EPHB4P54760 987 aa27.53■■■□□ 2
SSBP4-201ENST00000270061 CALCRLQ16602 461 aa27.53■■■□□ 2
SSBP4-201ENST00000270061 POTEDQ86YR6 584 aa27.53■■■□□ 2
SSBP4-201ENST00000270061 CEP57L1Q8IYX8 460 aa27.53■■■□□ 2
SSBP4-201ENST00000270061 PDLIM2Q96JY6 352 aa27.53■■■□□ 2
SSBP4-201ENST00000270061 TDP2O95551 362 aa27.53■■■□□ 2
SSBP4-201ENST00000270061 ZNF286BP0CG31 522 aa27.53■■■□□ 2
SSBP4-201ENST00000270061 PPIGQ13427 754 aaKnown RBP eCLIP27.53■■■□□ 21e-7■■■■□ 20.5
SSBP4-201ENST00000270061 GPRASP2Q96D09 838 aa27.53■■■□□ 2
SSBP4-201ENST00000270061 MBOAT7Q96N66 472 aa27.53■■■□□ 2
SSBP4-201ENST00000270061 SENP7Q9BQF6 1050 aa27.53■■■□□ 2
SSBP4-201ENST00000270061 NOC4LQ9BVI4 516 aaKnown RBP27.53■■■□□ 2
SSBP4-201ENST00000270061 NAT10Q9H0A0 1025 aaKnown RBP27.53■■■□□ 2
SSBP4-201ENST00000270061 NOP56O00567 594 aaKnown RBP27.52■■■□□ 2
SSBP4-201ENST00000270061 SLC37A4O43826 429 aa27.52■■■□□ 2
SSBP4-201ENST00000270061 F2P00734 622 aa27.52■■■□□ 2
SSBP4-201ENST00000270061 SARSP49591 514 aaKnown RBP27.52■■■□□ 2
SSBP4-201ENST00000270061 METTL7BQ6UX53 244 aa27.52■■■□□ 2
SSBP4-201ENST00000270061 C11orf57Q6ZUT1 292 aaPredicted RBP27.52■■■□□ 2
SSBP4-201ENST00000270061 CYFIP1Q7L576 1253 aa27.52■■■□□ 2
SSBP4-201ENST00000270061 SPATA20Q8TB22 786 aa27.52■■■□□ 2
SSBP4-201ENST00000270061 CDHR1Q96JP9 859 aa27.52■■■□□ 2
SSBP4-201ENST00000270061 BCAS3Q9H6U6 928 aa27.52■■■□□ 2
SSBP4-201ENST00000270061 PCDHA5Q9Y5H7 936 aa27.52■■■□□ 2
SSBP4-201ENST00000270061 CYP2C9P11712 490 aa27.51■■□□□ 1.99
SSBP4-201ENST00000270061 CSF2RAP15509 400 aa27.51■■□□□ 1.99
SSBP4-201ENST00000270061 FXR2P51116 673 aaKnown RBP eCLIP27.51■■□□□ 1.99
SSBP4-201ENST00000270061 IQCB1Q15051 598 aa27.51■■□□□ 1.99
SSBP4-201ENST00000270061 IGSF22Q8N9C0 903 aa27.51■■□□□ 1.99
SSBP4-201ENST00000270061 BPIFA3Q9BQP9 254 aa27.51■■□□□ 1.99
SSBP4-201ENST00000270061 DDX25Q9UHL0 483 aaKnown RBP27.51■■□□□ 1.99
SSBP4-201ENST00000270061 UMODL1Q5DID0 1318 aa27.51■■□□□ 1.99
SSBP4-201ENST00000270061 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.5■■□□□ 1.99
SSBP4-201ENST00000270061 ITGB5P18084 799 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 SREBF1P36956 1147 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 UBA7P41226 1012 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 PSEN2P49810 448 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 SESTD1Q86VW0 696 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 PAGE5Q96GU1 130 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 NOD1Q9Y239 953 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 KAT6AQ92794 2004 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 MTMR1Q13613 665 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 PDIA5Q14554 519 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 MFSD10Q14728 455 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 KIAA0753Q2KHM9 967 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 LUZP1Q86V48 1076 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 GIMAP8Q8ND71 665 aaPredicted RBP27.5■■□□□ 1.99
SSBP4-201ENST00000270061 UBIAD1Q9Y5Z9 338 aa27.5■■□□□ 1.99
SSBP4-201ENST00000270061 ARHGAP4P98171 946 aa27.49■■□□□ 1.99
SSBP4-201ENST00000270061 PDXDC2PQ6P474 469 aa27.49■■□□□ 1.99
SSBP4-201ENST00000270061 C7orf31Q8N865 590 aa27.49■■□□□ 1.99
SSBP4-201ENST00000270061 RNPC3Q96LT9 517 aaKnown RBP27.49■■□□□ 1.99
SSBP4-201ENST00000270061 DISC1Q9NRI5 854 aa27.49■■□□□ 1.99
SSBP4-201ENST00000270061 CCL23P55773 120 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 PTGISQ16647 500 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 DPCR1Q3MIW9 517 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 GPR153Q6NV75 609 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 TRIML1Q8N9V2 468 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 JADE2Q9NQC1 790 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 CCDC39Q9UFE4 941 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 SCN5AQ14524 2016 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 HAS3O00219 553 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 MAFGO15525 162 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 CYP3A4P08684 503 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 CIITAP33076 1130 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 TMEM266Q2M3C6 531 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 SMARCE1Q969G3 411 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 C16orf70Q9BSU1 422 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 RAB34Q9BZG1 259 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 WNT8AQ9H1J5 351 aa27.48■■□□□ 1.99
SSBP4-201ENST00000270061 BIN1O00499 593 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms