RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 A0A087WWV3 80 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 PP2D1A8MPX8 630 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 ZBTB42B2RXF5 422 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 RBAK-RBAKDNI3L0D1 243 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 HBP1O60381 514 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 OATP04181 439 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 P4HBP07237 508 aaKnown RBP14.32□□□□□ -0.12
SS18-202ENST00000269138 ITGB8P26012 769 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 MARCKSP29966 332 aaPredicted RBP14.32□□□□□ -0.12
SS18-202ENST00000269138 QARSP47897 775 aaKnown RBP14.32□□□□□ -0.12
SS18-202ENST00000269138 PSMC5P62195 406 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 GRIN1Q05586 938 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 TMEM266Q2M3C6 531 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 MARCH8Q5T0T0 291 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 TPH2Q8IWU9 490 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 DHX38Q92620 1227 aaKnown RBP14.32□□□□□ -0.12
SS18-202ENST00000269138 ATP6V0A1Q93050 837 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 WNT8BQ93098 351 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 LXNQ9BS40 222 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 NR2E3Q9Y5X4 410 aa14.32□□□□□ -0.12
SS18-202ENST00000269138 VWA3AA6NCI4 1184 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 DDX11L8A8MPP1 907 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 H0YGN5 161 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 ZBTB39O15060 712 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 KIAA0355O15063 1070 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 MED24O75448 989 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 SPATA31C1P0DKV0 1188 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 CDC25AP30304 524 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 ARL6IP4Q66PJ3 421 aaKnown RBP14.31□□□□□ -0.12
SS18-202ENST00000269138 IGSF22Q8N9C0 903 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 BBXQ8WY36 941 aaPredicted RBP14.31□□□□□ -0.12
SS18-202ENST00000269138 ZNF396Q96N95 335 aaPredicted RBP14.31□□□□□ -0.12
SS18-202ENST00000269138 SH2D3AQ9BRG2 576 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 LRWD1Q9UFC0 647 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 CEP131Q9UPN4 1083 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 NOD1Q9Y239 953 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 UMODL1Q5DID0 1318 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 NRCAMQ92823 1304 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 TNRC18O15417 2968 aaPredicted RBP14.31□□□□□ -0.12
SS18-202ENST00000269138 BMP15O95972 392 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 NASPP49321 788 aaPredicted RBP14.31□□□□□ -0.12
SS18-202ENST00000269138 DNM1Q05193 864 aaKnown RBP14.31□□□□□ -0.12
SS18-202ENST00000269138 PDIA5Q14554 519 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 XKR3Q5GH77 459 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 RUFY4Q6ZNE9 571 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 ANO5Q75V66 913 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 CATSPER3Q86XQ3 398 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 ZNF579Q8NAF0 562 aaKnown RBP14.31□□□□□ -0.12
SS18-202ENST00000269138 FAM167AQ96KS9 214 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 NOC4LQ9BVI4 516 aaKnown RBP14.31□□□□□ -0.12
SS18-202ENST00000269138 PPP1R12CQ9BZL4 782 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 ZSWIM4Q9H7M6 989 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 NRBP2Q9NSY0 501 aa14.31□□□□□ -0.12
SS18-202ENST00000269138 MBLAC1A4D2B0 266 aaPredicted RBP14.3□□□□□ -0.12
SS18-202ENST00000269138 RRN3P2A6NIE6 340 aa14.3□□□□□ -0.12
SS18-202ENST00000269138 GNAT1P11488 350 aa14.3□□□□□ -0.12
SS18-202ENST00000269138 CYP2C18P33260 490 aa14.3□□□□□ -0.12
SS18-202ENST00000269138 PTK7Q13308 1070 aa14.3□□□□□ -0.12
SS18-202ENST00000269138 SLC39A14Q15043 492 aa14.3□□□□□ -0.12
SS18-202ENST00000269138 ECM1Q16610 540 aa14.3□□□□□ -0.12
SS18-202ENST00000269138 TRIM71Q2Q1W2 868 aaKnown RBP14.3□□□□□ -0.12
SS18-202ENST00000269138 ZNF484Q5JVG2 852 aa14.3□□□□□ -0.12
SS18-202ENST00000269138 PLA2G4FQ68DD2 849 aa14.3□□□□□ -0.12
SS18-202ENST00000269138 SERINC5Q86VE9 423 aa14.3□□□□□ -0.12
SS18-202ENST00000269138 C4orf19Q8IY42 314 aa14.3□□□□□ -0.12
SS18-202ENST00000269138 MMTAG2Q9BU76 263 aaKnown RBP14.3□□□□□ -0.12
SS18-202ENST00000269138 HIPK3Q9H422 1215 aa14.3□□□□□ -0.12
SS18-202ENST00000269138 SEPT9Q9UHD8 586 aaPredicted RBP14.3□□□□□ -0.12
SS18-202ENST00000269138 TUBE1Q9UJT0 475 aa14.3□□□□□ -0.12
SS18-202ENST00000269138 FBXO2Q9UK22 296 aaPredicted RBP14.3□□□□□ -0.12
SS18-202ENST00000269138 KLRC1P26715 233 aa14.29□□□□□ -0.12
SS18-202ENST00000269138 CCT6AP40227 531 aaKnown RBP14.29□□□□□ -0.12
SS18-202ENST00000269138 NPEPPSP55786 919 aa14.29□□□□□ -0.12
SS18-202ENST00000269138 STK38Q15208 465 aa14.29□□□□□ -0.12
SS18-202ENST00000269138 TARBP2Q15633 366 aaKnown RBP14.29□□□□□ -0.12
SS18-202ENST00000269138 MTERF2Q49AM1 385 aa14.29□□□□□ -0.12
SS18-202ENST00000269138 POTEGQ6S5H5 508 aa14.29□□□□□ -0.12
SS18-202ENST00000269138 MTHFD1LQ6UB35 978 aa14.29□□□□□ -0.12
SS18-202ENST00000269138 LINC00301Q8NCQ3 95 aa14.29□□□□□ -0.12
SS18-202ENST00000269138 ERMNQ8TAM6 284 aa14.29□□□□□ -0.12
SS18-202ENST00000269138 NEK9Q8TD19 979 aa14.29□□□□□ -0.12
SS18-202ENST00000269138 TNPO1Q92973 898 aaKnown RBP14.29□□□□□ -0.12
SS18-202ENST00000269138 CLIC6Q96NY7 704 aa14.29□□□□□ -0.12
SS18-202ENST00000269138 CEP89Q96ST8 783 aa14.29□□□□□ -0.12
SS18-202ENST00000269138 POLR3CQ9BUI4 534 aaPredicted RBP14.29□□□□□ -0.12
SS18-202ENST00000269138 NIFKQ9BYG3 293 aaKnown RBP14.29□□□□□ -0.12
SS18-202ENST00000269138 TUFT1Q9NNX1 390 aa14.29□□□□□ -0.12
SS18-202ENST00000269138 PRKAG2Q9UGJ0 569 aa14.29□□□□□ -0.12
SS18-202ENST00000269138 COL1A2P08123 1366 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 DKC1O60832 514 aaKnown RBP eCLIP14.28□□□□□ -0.12
SS18-202ENST00000269138 LYPLA2O95372 231 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 C22orf31O95567 290 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 TIMP1P01033 207 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 RAG1P15918 1043 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 RPA1P27694 616 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 YWHABP31946 246 aaKnown RBP14.28□□□□□ -0.12
SS18-202ENST00000269138 CCL23P55773 120 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 NUCB2P80303 420 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 SPECC1Q5M775 1068 aa14.28□□□□□ -0.12
SS18-202ENST00000269138 SNX29Q8TEQ0 813 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms