RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 IRF2BP2Q7Z5L9 587 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 TBC1D16Q8TBP0 767 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 GCNT4Q9P109 453 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 NAGPAQ9UK23 515 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 KIF4AO95239 1232 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 PON1P27169 355 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 GLG1Q92896 1179 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 CAVIN3Q969G5 261 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 CCT8L2Q96SF2 557 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 RUSC1Q9BVN2 902 aa18.37■□□□□ 0.53
SQLE-201ENST00000265896 CDCA7Q9BWT1 371 aaPredicted RBP18.37■□□□□ 0.53
SQLE-201ENST00000265896 NOVA2Q9UNW9 492 aaKnown RBP18.37■□□□□ 0.53
SQLE-201ENST00000265896 KIAA0754O94854 1291 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 HNRNPH1P31943 449 aaKnown RBP18.36■□□□□ 0.53
SQLE-201ENST00000265896 PPP1R2P41236 205 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 QPCTQ16769 361 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 PALB2Q86YC2 1186 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 KIAA0825Q8IV33 1275 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 ZNF473Q8WTR7 871 aaKnown RBP18.36■□□□□ 0.53
SQLE-201ENST00000265896 ANO3Q9BYT9 981 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 ATP8A1Q9Y2Q0 1164 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 ZBTB5O15062 677 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 XRCC5P13010 732 aaKnown RBP18.36■□□□□ 0.53
SQLE-201ENST00000265896 CYP2J2P51589 502 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 DHX9Q08211 1270 aaKnown RBP18.36■□□□□ 0.53
SQLE-201ENST00000265896 RNF10Q8N5U6 811 aaKnown RBP18.36■□□□□ 0.53
SQLE-201ENST00000265896 DHX36Q9H2U1 1008 aaKnown RBP18.36■□□□□ 0.53
SQLE-201ENST00000265896 TMOD4Q9NZQ9 345 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 DLEC1Q9Y238 1755 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 MYH1P12882 1939 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 FAM86B1E9PN63 330 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 FAM86B2P0C5J1 330 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 TAS2R14Q9NYV8 317 aa18.36■□□□□ 0.53
SQLE-201ENST00000265896 SHMT1P34896 483 aa18.35■□□□□ 0.53
SQLE-201ENST00000265896 ASPRV1Q53RT3 343 aa18.35■□□□□ 0.53
SQLE-201ENST00000265896 ATP6V1G3Q96LB4 118 aa18.35■□□□□ 0.53
SQLE-201ENST00000265896 ACP6Q9NPH0 428 aa18.35■□□□□ 0.53
SQLE-201ENST00000265896 CNOT8Q9UFF9 292 aaKnown RBP18.35■□□□□ 0.53
SQLE-201ENST00000265896 PCDHGC5Q9Y5F6 944 aa18.35■□□□□ 0.53
SQLE-201ENST00000265896 IGSF9BQ9UPX0 1349 aa18.35■□□□□ 0.53
SQLE-201ENST00000265896 PHF20L1A8MW92 1017 aa18.35■□□□□ 0.53
SQLE-201ENST00000265896 PPP1R37O75864 691 aa18.35■□□□□ 0.53
SQLE-201ENST00000265896 FGGP02679 453 aa18.35■□□□□ 0.53
SQLE-201ENST00000265896 ECHS1P30084 290 aa18.35■□□□□ 0.53
SQLE-201ENST00000265896 ZNF746Q6NUN9 644 aaPredicted RBP18.35■□□□□ 0.53
SQLE-201ENST00000265896 CD248Q9HCU0 757 aa18.35■□□□□ 0.53
SQLE-201ENST00000265896 GOLGA6L10A6NI86 522 aa18.34■□□□□ 0.53
SQLE-201ENST00000265896 HGSO14964 777 aaPredicted RBP18.34■□□□□ 0.53
SQLE-201ENST00000265896 EEF2P13639 858 aaKnown RBP18.34■□□□□ 0.53
SQLE-201ENST00000265896 TNNC1P63316 161 aa18.34■□□□□ 0.53
SQLE-201ENST00000265896 GIT2Q14161 759 aa18.34■□□□□ 0.53
SQLE-201ENST00000265896 NLRP14Q86W24 1093 aa18.34■□□□□ 0.53
SQLE-201ENST00000265896 TPH2Q8IWU9 490 aa18.34■□□□□ 0.53
SQLE-201ENST00000265896 TAF1DQ9H5J8 278 aaPredicted RBP18.34■□□□□ 0.53
SQLE-201ENST00000265896 DBNDD1Q9H9R9 158 aa18.34■□□□□ 0.53
SQLE-201ENST00000265896 LRRC4BQ9NT99 713 aa18.34■□□□□ 0.53
SQLE-201ENST00000265896 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.34■□□□□ 0.53
SQLE-201ENST00000265896 TISP43B9A030 160 aa18.34■□□□□ 0.53
SQLE-201ENST00000265896 G3V3G9 751 aa18.34■□□□□ 0.53
SQLE-201ENST00000265896 SEPT2Q15019 361 aa18.34■□□□□ 0.53
SQLE-201ENST00000265896 PTGISQ16647 500 aa18.34■□□□□ 0.53
SQLE-201ENST00000265896 DCAF8Q5TAQ9 597 aa18.34■□□□□ 0.53
SQLE-201ENST00000265896 ZNF572Q7Z3I7 529 aaPredicted RBP18.34■□□□□ 0.53
SQLE-201ENST00000265896 LUC7LQ9NQ29 371 aaKnown RBP18.34■□□□□ 0.53
SQLE-201ENST00000265896 DDX39AO00148 427 aaKnown RBP18.33■□□□□ 0.53
SQLE-201ENST00000265896 EML1O00423 815 aa18.33■□□□□ 0.53
SQLE-201ENST00000265896 DDX3XO00571 662 aaKnown RBP eCLIP18.33■□□□□ 0.534e-43■■■■■ 54.8
SQLE-201ENST00000265896 AFPP02771 609 aaKnown RBP18.33■□□□□ 0.53
SQLE-201ENST00000265896 ZNF76P36508 570 aa18.33■□□□□ 0.53
SQLE-201ENST00000265896 USP8P40818 1118 aa18.33■□□□□ 0.53
SQLE-201ENST00000265896 SLCO1A2P46721 670 aa18.33■□□□□ 0.53
SQLE-201ENST00000265896 SLC12A3P55017 1021 aa18.33■□□□□ 0.53
SQLE-201ENST00000265896 MAGOHP61326 146 aaKnown RBP18.33■□□□□ 0.53
SQLE-201ENST00000265896 PSMD2Q13200 908 aa18.33■□□□□ 0.53
SQLE-201ENST00000265896 CPNE8Q86YQ8 564 aa18.33■□□□□ 0.53
SQLE-201ENST00000265896 MYCBPAPQ8TBZ2 947 aa18.33■□□□□ 0.53
SQLE-201ENST00000265896 MAGOHBQ96A72 148 aaKnown RBP18.33■□□□□ 0.53
SQLE-201ENST00000265896 PPP1R9AQ9ULJ8 1098 aa18.33■□□□□ 0.53
SQLE-201ENST00000265896 ESYT2A0FGR8 921 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 GCOM1H8Y6P7 765 aaPredicted RBP18.33■□□□□ 0.52
SQLE-201ENST00000265896 MYZAPP0CAP1 466 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 MDH1P40925 334 aaKnown RBP18.33■□□□□ 0.52
SQLE-201ENST00000265896 ARHGAP4P98171 946 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 KRT71Q3SY84 523 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 PPP4R3AQ6IN85 833 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 PROM2Q8N271 834 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 GGT7Q9UJ14 662 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 CNTNAP4Q9C0A0 1308 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 LAMB1P07942 1786 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 KDM4FA0A1W2PPD8 638 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 UBAP1LF5GYI3 381 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 RBAK-RBAKDNI3L0D1 243 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 NR3C1P04150 777 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 SERPINB2P05120 415 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 GALCP54803 685 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 ACTN3Q08043 901 aaPredicted RBP18.33■□□□□ 0.52
SQLE-201ENST00000265896 ZNF844Q08AG5 666 aa18.33■□□□□ 0.52
SQLE-201ENST00000265896 SF3B2Q13435 895 aaKnown RBP18.33■□□□□ 0.52
SQLE-201ENST00000265896 ZYXQ15942 572 aaKnown RBP18.33■□□□□ 0.52
SQLE-201ENST00000265896 EFCC1Q9HA90 598 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms