RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TMEM237Q96Q45 408 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 ZKSCAN3Q9BRR0 538 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 EPB41L4BQ9H329 900 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 RMI1Q9H9A7 625 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 FAM207AQ9NSI2 230 aaPredicted RBP9.55□□□□□ -0.88
VAPB-201ENST00000265619 ZNF510Q9Y2H8 683 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 MYH4Q9Y623 1939 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 A0A1W2PQC6 194 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 ASAP2O43150 1006 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 ZBTB43O43298 467 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 ATP6V1C1P21283 382 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 ALDH1B1P30837 517 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 IFI16Q16666 785 aaKnown RBP9.55□□□□□ -0.88
VAPB-201ENST00000265619 TPTE2Q6XPS3 522 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 CCDC155Q8N6L0 562 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 ANKS4BQ8N8V4 417 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 IGDCC4Q8TDY8 1250 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 FAM136AQ96C01 138 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 PBKQ96KB5 322 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 CRAMP1Q96RY5 1269 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 TUBGCP2Q9BSJ2 902 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 PACSIN1Q9BY11 444 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 TRIM31Q9BZY9 425 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 FGFR1OP2Q9NVK5 253 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 NPHP3-ACAD11A0A0J9YXS1 232 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 TLDC2A0PJX2 215 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 FAM170AA1A519 330 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 TPBGLP0DKB5 382 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 CREB1P16220 341 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 PEX5P50542 639 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 PARP10Q53GL7 1025 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 TMC3Q7Z5M5 1100 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 TEX9Q8N6V9 391 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 ARL10Q8N8L6 244 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 FGD4Q96M96 766 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 PLIN2Q99541 437 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 DUSP9Q99956 384 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 MOV10L1Q9BXT6 1211 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 DPH5Q9H2P9 285 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 LY9Q9HBG7 655 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 ZNF213O14771 459 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 SNX3O60493 162 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 OAS1P00973 400 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 CCNFP41002 786 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 MAGEA1P43355 309 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 DHX9Q08211 1270 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 SSRP1Q08945 709 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 ARMC9Q7Z3E5 817 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 MGARPQ8TDB4 240 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 LRRC15Q8TF66 581 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 DDX23Q9BUQ8 820 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 ZWILCHQ9H900 591 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 PIH1D3Q9NQM4 214 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 EXOC1Q9NV70 894 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 ZNHIT6Q9NWK9 470 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 ATP8A1Q9Y2Q0 1164 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 USO1O60763 962 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 GNA14O95837 355 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 RPN1P04843 607 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 PTDSS1P48651 473 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 SPAG1Q07617 926 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 TRIM28Q13263 835 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 LBRQ14739 615 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 PUM3Q15397 648 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 RILPL1Q5EBL4 403 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 ACBD5Q5T8D3 534 aaPredicted RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 USP38Q8NB14 1042 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 BICD1Q96G01 975 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 PPP1R12CQ9BZL4 782 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 THAP9Q9H5L6 903 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 AMACRQ9UHK6 382 aa9.54□□□□□ -0.88
VAPB-201ENST00000265619 BAZ2BQ9UIF8 2168 aaKnown RBP9.54□□□□□ -0.88
VAPB-201ENST00000265619 MINDY4BA8MYZ0 360 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 RPS6KA4O75676 772 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 CSF1RP07333 972 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 SLCO1A2P46721 670 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 SESN3P58005 492 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 MRPS35P82673 323 aaKnown RBP9.53□□□□□ -0.88
VAPB-201ENST00000265619 SGSM1Q2NKQ1 1148 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 CERKLQ49MI3 558 aaPredicted RBP9.53□□□□□ -0.88
VAPB-201ENST00000265619 ZNF658Q5TYW1 1059 aaPredicted RBP9.53□□□□□ -0.88
VAPB-201ENST00000265619 TSHZ1Q6ZSZ6 1077 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 ADSSL1Q8N142 457 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 RPGRQ92834 1020 aaKnown RBP9.53□□□□□ -0.88
VAPB-201ENST00000265619 CCDC97Q96F63 343 aaPredicted RBP9.53□□□□□ -0.88
VAPB-201ENST00000265619 AZI2Q9H6S1 392 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 ABCC12Q96J65 1359 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 LRRC53A6NM62 1247 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 RIMBP2O15034 1052 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 AKR1B10O60218 316 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 ENTPD5O75356 428 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 KLRC1P26715 233 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 GSTT1P30711 240 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 USP46P62068 366 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 KLC1Q07866 573 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 RASGRF1Q13972 1273 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 NFIXQ14938 502 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 RUFY4Q6ZNE9 571 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 HPS3Q969F9 1004 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 TRIM47Q96LD4 638 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms