RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 MEIS1O00470 390 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 CDR2Q01850 454 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 PFKFB3Q16875 520 aaPredicted RBP16.28■□□□□ 0.2
CASC3-201ENST00000264645 CCDC24Q8N4L8 307 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 MSL3Q8N5Y2 521 aaKnown RBP16.28■□□□□ 0.2
CASC3-201ENST00000264645 CCDC127Q96BQ5 260 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 TTC1Q99614 292 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 CENPKQ9BS16 269 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 ADGRB2O60241 1585 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 TOM1O60784 492 aa16.27■□□□□ 0.2
CASC3-201ENST00000264645 SPARCL1Q14515 664 aa16.27■□□□□ 0.2
CASC3-201ENST00000264645 EPM2AIP1Q7L775 607 aaPredicted RBP16.27■□□□□ 0.2
CASC3-201ENST00000264645 FAM178BQ8IXR5 827 aa16.27■□□□□ 0.2
CASC3-201ENST00000264645 ST13P4Q8IZP2 240 aaPredicted RBP16.27■□□□□ 0.2
CASC3-201ENST00000264645 ZFP69BQ9UJL9 534 aa16.27■□□□□ 0.2
CASC3-201ENST00000264645 ANAPC4Q9UJX5 808 aa16.27■□□□□ 0.2
CASC3-201ENST00000264645 PRPF6O94906 941 aaKnown RBP16.27■□□□□ 0.2
CASC3-201ENST00000264645 FOXO4P98177 505 aa16.27■□□□□ 0.2
CASC3-201ENST00000264645 CHRNDQ07001 517 aa16.27■□□□□ 0.2
CASC3-201ENST00000264645 DYNC1I2Q13409 638 aaKnown RBP16.27■□□□□ 0.2
CASC3-201ENST00000264645 USH1GQ495M9 461 aa16.27■□□□□ 0.2
CASC3-201ENST00000264645 CEP70Q8NHQ1 597 aa16.27■□□□□ 0.2
CASC3-201ENST00000264645 ANKS1AQ92625 1134 aa16.27■□□□□ 0.2
CASC3-201ENST00000264645 COA7Q96BR5 231 aa16.27■□□□□ 0.2
CASC3-201ENST00000264645 PSTPIP2Q9H939 334 aa16.27■□□□□ 0.2
CASC3-201ENST00000264645 TMOD4Q9NZQ9 345 aa16.27■□□□□ 0.2
CASC3-201ENST00000264645 PCP11498 1178 aaKnown RBP16.27■□□□□ 0.19
CASC3-201ENST00000264645 SKOR1P84550 965 aa16.27■□□□□ 0.19
CASC3-201ENST00000264645 HSP90AA5PQ58FG0 334 aa16.27■□□□□ 0.19
CASC3-201ENST00000264645 WDR44Q5JSH3 913 aa16.27■□□□□ 0.19
CASC3-201ENST00000264645 LRRC47Q8N1G4 583 aaKnown RBP16.27■□□□□ 0.19
CASC3-201ENST00000264645 SUDS3Q9H7L9 328 aaPredicted RBP16.27■□□□□ 0.19
CASC3-201ENST00000264645 ATP8A2Q9NTI2 1148 aa16.27■□□□□ 0.19
CASC3-201ENST00000264645 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 GUF1Q8N442 669 aaKnown RBP16.26■□□□□ 0.19
CASC3-201ENST00000264645 SYT2Q8N9I0 419 aaPredicted RBP16.26■□□□□ 0.19
CASC3-201ENST00000264645 CAVIN3Q969G5 261 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 ERP27Q96DN0 273 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 TRPA1O75762 1119 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 RHOBTB3O94955 611 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 LMNAP02545 664 aaKnown RBP16.26■□□□□ 0.19
CASC3-201ENST00000264645 PHBP35232 272 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 RFX5P48382 616 aaPredicted RBP16.26■□□□□ 0.19
CASC3-201ENST00000264645 SLC29A2Q14542 456 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 LONRF1Q17RB8 773 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 BBOF1Q8ND07 529 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 FNBP1Q96RU3 617 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 PIGSQ96S52 555 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 TMEM2Q9UHN6 1383 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 CFAP69A5D8W1 941 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 DDX39AO00148 427 aaKnown RBP16.26■□□□□ 0.19
CASC3-201ENST00000264645 AGTP01019 485 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 HSPA9P38646 679 aaKnown RBP16.26■□□□□ 0.19
CASC3-201ENST00000264645 SARSP49591 514 aaKnown RBP16.26■□□□□ 0.19
CASC3-201ENST00000264645 LGSNQ5TDP6 509 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 GLYCTKQ8IVS8 523 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 DNAJC9Q8WXX5 260 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 ADAM33Q9BZ11 813 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 FAM53CQ9NYF3 392 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 ANGPTL2Q9UKU9 493 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 NQO1P15559 274 aaKnown RBP16.26■□□□□ 0.19
CASC3-201ENST00000264645 IRX4P78413 519 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 ITIH3Q06033 890 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 GRAMD1BQ3KR37 738 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 GIMAP8Q8ND71 665 aaPredicted RBP16.26■□□□□ 0.19
CASC3-201ENST00000264645 PIP4K2CQ8TBX8 421 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 HAUS1Q96CS2 278 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 SETDB2Q96T68 719 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 PHF20Q9BVI0 1012 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 LEMD3Q9Y2U8 911 aa16.26■□□□□ 0.19
CASC3-201ENST00000264645 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.25■□□□□ 0.19
CASC3-201ENST00000264645 UBOX5O94941 541 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 CPP00450 1065 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 GNAT1P11488 350 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 COPB2P35606 906 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 HP1BP3Q5SSJ5 553 aaPredicted RBP16.25■□□□□ 0.19
CASC3-201ENST00000264645 CCDC137Q6PK04 289 aaKnown RBP16.25■□□□□ 0.19
CASC3-201ENST00000264645 CREG2Q8IUH2 290 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 MAK16Q9BXY0 300 aaKnown RBP16.25■□□□□ 0.19
CASC3-201ENST00000264645 NRKQ7Z2Y5 1582 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 USP17L3A6NCW0 530 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 USP17L4A6NCW7 530 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 OPLAHO14841 1288 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 SPAG7O75391 227 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 MRPS35P82673 323 aaKnown RBP16.25■□□□□ 0.19
CASC3-201ENST00000264645 KIAA1755Q5JYT7 1200 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 USP17L1Q7RTZ2 530 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 ARHGAP20Q9P2F6 1191 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 ANKARQ7Z5J8 1434 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 BAZ2BQ9UIF8 2168 aaKnown RBP16.25■□□□□ 0.19
CASC3-201ENST00000264645 PXDNLA1KZ92 1463 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 MYO3AQ8NEV4 1616 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 PLA2G4BP0C869 781 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 PRLRP16471 622 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 ALX1Q15699 326 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 NSMFQ6X4W1 530 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 MAML1Q92585 1016 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 DYNLL2Q96FJ2 89 aa16.25■□□□□ 0.19
CASC3-201ENST00000264645 PAPOLBQ9NRJ5 636 aaKnown RBP16.25■□□□□ 0.19
CASC3-201ENST00000264645 SLC4A7Q9Y6M7 1214 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms