RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 SUV39H1O43463 412 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 VAMP4O75379 141 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 BAG4O95429 457 aaKnown RBP4.56□□□□□ -1.68
CDRT1-201ENST00000261644 EPHX1P07099 455 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 NASPP49321 788 aaPredicted RBP4.56□□□□□ -1.68
CDRT1-201ENST00000261644 ZNF143P52747 638 aaPredicted RBP4.56□□□□□ -1.68
CDRT1-201ENST00000261644 ITGA1P56199 1179 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 ANAPC15P60006 121 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 GNPTABQ3T906 1256 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 ZC3H18Q86VM9 953 aaKnown RBP4.56□□□□□ -1.68
CDRT1-201ENST00000261644 FAM126BQ8IXS8 530 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 DHX37Q8IY37 1157 aaKnown RBP4.56□□□□□ -1.68
CDRT1-201ENST00000261644 FTSJ3Q8IY81 847 aaKnown RBP4.56□□□□□ -1.68
CDRT1-201ENST00000261644 FAM184AQ8NB25 1140 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 SLC16A11Q8NCK7 471 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 ADCY4Q8NFM4 1077 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 KLHL6Q8WZ60 621 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 UBXN4Q92575 508 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 LOXL4Q96JB6 756 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 PANK2Q9BZ23 570 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 AP5M1Q9H0R1 490 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 RXFP1Q9HBX9 757 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 LMBRD1Q9NUN5 540 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 PPP1R1BQ9UD71 204 aaPredicted RBP4.56□□□□□ -1.68
CDRT1-201ENST00000261644 PIK3C2BO00750 1634 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 ATP7AQ04656 1500 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 CPSF1Q10570 1443 aaKnown RBP4.55□□□□□ -1.68
CDRT1-201ENST00000261644 CD109Q6YHK3 1445 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 ANKRD26Q9UPS8 1709 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 AATKQ6ZMQ8 1374 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 ABCC4O15439 1325 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 A0A1W2PQH9 124 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 CYR61O00622 381 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 CDC45O75419 566 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 LETM1O95202 739 aaPredicted RBP4.55□□□□□ -1.68
CDRT1-201ENST00000261644 MBD3O95983 291 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 NTRK1P04629 796 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 CASP7P55210 303 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 FAM193AP78312 1265 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 HMGN5P82970 282 aaKnown RBP4.55□□□□□ -1.68
CDRT1-201ENST00000261644 SMAD4Q13485 552 aaKnown RBP4.55□□□□□ -1.68
CDRT1-201ENST00000261644 C9orf131Q5VYM1 1079 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 PKN3Q6P5Z2 889 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 PLEKHH3Q7Z736 793 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 CPNE8Q86YQ8 564 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 CRACR2BQ8N4Y2 399 aaPredicted RBP4.55□□□□□ -1.68
CDRT1-201ENST00000261644 NAP1L5Q96NT1 182 aaPredicted RBP4.55□□□□□ -1.68
CDRT1-201ENST00000261644 FAM86C1Q9NVL1 165 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 IFT57Q9NWB7 429 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 INVSQ9Y283 1065 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 ZKSCAN5Q9Y2L8 839 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 ARHGEF40Q8TER5 1519 aa4.55□□□□□ -1.68
CDRT1-201ENST00000261644 CLTCQ00610 1675 aaKnown RBP4.54□□□□□ -1.68
CDRT1-201ENST00000261644 SOS1Q07889 1333 aaPredicted RBP4.54□□□□□ -1.68
CDRT1-201ENST00000261644 CFAP74Q9C0B2 1584 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 UGGT1Q9NYU2 1555 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 ANKRD34BA5PLL1 514 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 SGSM2O43147 1006 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 TPM3P06753 285 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 ZNF28P17035 718 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 TACR2P21452 398 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 EIF6P56537 245 aaKnown RBP4.54□□□□□ -1.68
CDRT1-201ENST00000261644 RIPK4P57078 832 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 GNAI1P63096 354 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 RACK1P63244 317 aaKnown RBP4.54□□□□□ -1.68
CDRT1-201ENST00000261644 EXOSC9Q06265 439 aaKnown RBP4.54□□□□□ -1.68
CDRT1-201ENST00000261644 CUL4AQ13619 759 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 CNGB1Q14028 1251 aaPredicted RBP4.54□□□□□ -1.68
CDRT1-201ENST00000261644 SYCP1Q15431 976 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 TESK1Q15569 626 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 ZNF394Q53GI3 561 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 MROH9Q5TGP6 573 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 FBXW10Q5XX13 1052 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 POMZP3Q6PJE2 187 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 CRIP3Q6Q6R5 217 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 LRSAM1Q6UWE0 723 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 TMEM57Q8N5G2 664 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 TXNDC5Q8NBS9 432 aaKnown RBP4.54□□□□□ -1.68
CDRT1-201ENST00000261644 DNERQ8NFT8 737 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 USP33Q8TEY7 942 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 LCORQ96JN0 433 aaPredicted RBP4.54□□□□□ -1.68
CDRT1-201ENST00000261644 CDK5RAP1Q96SZ6 601 aaKnown RBP4.54□□□□□ -1.68
CDRT1-201ENST00000261644 PSMD1Q99460 953 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 API5Q9BZZ5 524 aaKnown RBP4.54□□□□□ -1.68
CDRT1-201ENST00000261644 SLC12A5Q9H2X9 1139 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 SMC4Q9NTJ3 1288 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 SLC52A1Q9NWF4 448 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 PRDM4Q9UKN5 801 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 NOB1Q9ULX3 412 aaKnown RBP4.54□□□□□ -1.68
CDRT1-201ENST00000261644 EMC9Q9Y3B6 208 aa4.54□□□□□ -1.68
CDRT1-201ENST00000261644 FYB1O15117 783 aa4.53□□□□□ -1.68
CDRT1-201ENST00000261644 LAMTOR5O43504 91 aa4.53□□□□□ -1.68
CDRT1-201ENST00000261644 REC8O95072 547 aa4.53□□□□□ -1.68
CDRT1-201ENST00000261644 KIF20AO95235 890 aa4.53□□□□□ -1.68
CDRT1-201ENST00000261644 MSNP26038 577 aaKnown RBP4.53□□□□□ -1.68
CDRT1-201ENST00000261644 ACVRL1P37023 503 aa4.53□□□□□ -1.68
CDRT1-201ENST00000261644 LMOD3Q0VAK6 560 aa4.53□□□□□ -1.68
CDRT1-201ENST00000261644 CDSNQ15517 529 aa4.53□□□□□ -1.68
CDRT1-201ENST00000261644 DPY19L1Q2PZI1 675 aa4.53□□□□□ -1.68
CDRT1-201ENST00000261644 E4F1Q66K89 784 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms